Gene : Medtr3g102020 M. truncatula Mt4.0v1
Defline:  (1 of 166) PF02458 - Transferase family (Transferase) Description:  HXXXD-type acyl-transferase family protein
Genomic Order:  5596 Name:  ? Medtr3g102020
Secondary Identifier:  ? PAC:31053587
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g102020 0.5kb upstream 0.5kb upstream 2195 true chr3: 46996931-46999125 Medicago truncatula
Medtr3g102020 0.5kb upstream 0.5kb upstream 500 false chr3: 46998626-46999125 Medicago truncatula
Medtr3g102020 0.5kb downstream 0.5kb downstream 2195 true chr3: 46996431-46998625 Medicago truncatula
Medtr3g102020 0.5kb downstream 0.5kb downstream 500 false chr3: 46996431-46996930 Medicago truncatula
Medtr3g102020 1.0kb upstream 1.0kb upstream 2695 true chr3: 46996931-46999625 Medicago truncatula
Medtr3g102020 1.0kb upstream 1.0kb upstream 1000 false chr3: 46998626-46999625 Medicago truncatula
Medtr3g102020 1.0kb downstream 1.0kb downstream 2695 true chr3: 46995931-46998625 Medicago truncatula
Medtr3g102020 1.0kb downstream 1.0kb downstream 1000 false chr3: 46995931-46996930 Medicago truncatula
Medtr3g102020 2.0kb upstream 2.0kb upstream 3695 true chr3: 46996931-47000625 Medicago truncatula
Medtr3g102020 2.0kb upstream 2.0kb upstream 2000 false chr3: 46998626-47000625 Medicago truncatula
Medtr3g102020 2.0kb downstream 2.0kb downstream 3695 true chr3: 46994931-46998625 Medicago truncatula
Medtr3g102020 2.0kb downstream 2.0kb downstream 2000 false chr3: 46994931-46996930 Medicago truncatula
Medtr3g102020 5.0kb upstream 5.0kb upstream 6695 true chr3: 46996931-47003625 Medicago truncatula
Medtr3g102020 5.0kb upstream 5.0kb upstream 5000 false chr3: 46998626-47003625 Medicago truncatula
Medtr3g102020 5.0kb downstream 5.0kb downstream 6695 true chr3: 46991931-46998625 Medicago truncatula
Medtr3g102020 5.0kb downstream 5.0kb downstream 5000 false chr3: 46991931-46996930 Medicago truncatula
Medtr3g102020 10.0kb upstream 10.0kb upstream 11695 true chr3: 46996931-47008625 Medicago truncatula
Medtr3g102020 10.0kb upstream 10.0kb upstream 10000 false chr3: 46998626-47008625 Medicago truncatula
Medtr3g102020 10.0kb downstream 10.0kb downstream 11695 true chr3: 46986931-46998625 Medicago truncatula
Medtr3g102020 10.0kb downstream 10.0kb downstream 10000 false chr3: 46986931-46996930 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300600 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.412        
cufflinks 0.077       Low
cufflinks 0.08       Low
cufflinks 12.695     High  
cufflinks 0.088       Low
cufflinks 15.482     High  
cufflinks 14.577     High  
cufflinks 0.15        
cufflinks 23.606     High High

0 Strain