Gene : Medtr3g101970 M. truncatula Mt4.0v1
Defline:  (1 of 166) PF02458 - Transferase family (Transferase) Description:  HXXXD-type acyl-transferase family protein
Genomic Order:  5593 Name:  ? Medtr3g101970
Secondary Identifier:  ? PAC:31060916
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-361 Medicago truncatula pathologic  
Mtruncatula PWY-6040 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g101970 0.5kb upstream 0.5kb upstream 1857 true chr3: 46980131-46981987 Medicago truncatula
Medtr3g101970 0.5kb upstream 0.5kb upstream 500 false chr3: 46981488-46981987 Medicago truncatula
Medtr3g101970 0.5kb downstream 0.5kb downstream 1857 true chr3: 46979631-46981487 Medicago truncatula
Medtr3g101970 0.5kb downstream 0.5kb downstream 500 false chr3: 46979631-46980130 Medicago truncatula
Medtr3g101970 1.0kb upstream 1.0kb upstream 2357 true chr3: 46980131-46982487 Medicago truncatula
Medtr3g101970 1.0kb upstream 1.0kb upstream 1000 false chr3: 46981488-46982487 Medicago truncatula
Medtr3g101970 1.0kb downstream 1.0kb downstream 2357 true chr3: 46979131-46981487 Medicago truncatula
Medtr3g101970 1.0kb downstream 1.0kb downstream 1000 false chr3: 46979131-46980130 Medicago truncatula
Medtr3g101970 2.0kb upstream 2.0kb upstream 3357 true chr3: 46980131-46983487 Medicago truncatula
Medtr3g101970 2.0kb upstream 2.0kb upstream 2000 false chr3: 46981488-46983487 Medicago truncatula
Medtr3g101970 2.0kb downstream 2.0kb downstream 3357 true chr3: 46978131-46981487 Medicago truncatula
Medtr3g101970 2.0kb downstream 2.0kb downstream 2000 false chr3: 46978131-46980130 Medicago truncatula
Medtr3g101970 5.0kb upstream 5.0kb upstream 6357 true chr3: 46980131-46986487 Medicago truncatula
Medtr3g101970 5.0kb upstream 5.0kb upstream 5000 false chr3: 46981488-46986487 Medicago truncatula
Medtr3g101970 5.0kb downstream 5.0kb downstream 6357 true chr3: 46975131-46981487 Medicago truncatula
Medtr3g101970 5.0kb downstream 5.0kb downstream 5000 false chr3: 46975131-46980130 Medicago truncatula
Medtr3g101970 10.0kb upstream 10.0kb upstream 11357 true chr3: 46980131-46991487 Medicago truncatula
Medtr3g101970 10.0kb upstream 10.0kb upstream 10000 false chr3: 46981488-46991487 Medicago truncatula
Medtr3g101970 10.0kb downstream 10.0kb downstream 11357 true chr3: 46970131-46981487 Medicago truncatula
Medtr3g101970 10.0kb downstream 10.0kb downstream 10000 false chr3: 46970131-46980130 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300600 5265 Fabidae View MSA
124068484 5270 Rosid View MSA
123747860 5271 Pentapetalae View MSA
122791254 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.079        
cufflinks 0.064     Low  
cufflinks 0.077     Low  
cufflinks 1.541       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.638        
cufflinks 0.051     Low  
cufflinks 1.375       High

0 Strain