Gene : Medtr3g102120 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12864//PTHR12864:SF23 - RAN BINDING PROTEIN 9-RELATED Description:  SPla/RYanodine receptor (SPRY) domain protein
Genomic Order:  5601 Name:  ? Medtr3g102120
Secondary Identifier:  ? PAC:31058699
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g102120 0.5kb upstream 0.5kb upstream 3159 true chr3: 47046602-47049760 Medicago truncatula
Medtr3g102120 0.5kb upstream 0.5kb upstream 500 false chr3: 47046602-47047101 Medicago truncatula
Medtr3g102120 0.5kb downstream 0.5kb downstream 3159 true chr3: 47047102-47050260 Medicago truncatula
Medtr3g102120 0.5kb downstream 0.5kb downstream 500 false chr3: 47049761-47050260 Medicago truncatula
Medtr3g102120 1.0kb upstream 1.0kb upstream 3659 true chr3: 47046102-47049760 Medicago truncatula
Medtr3g102120 1.0kb upstream 1.0kb upstream 1000 false chr3: 47046102-47047101 Medicago truncatula
Medtr3g102120 1.0kb downstream 1.0kb downstream 3659 true chr3: 47047102-47050760 Medicago truncatula
Medtr3g102120 1.0kb downstream 1.0kb downstream 1000 false chr3: 47049761-47050760 Medicago truncatula
Medtr3g102120 2.0kb upstream 2.0kb upstream 4659 true chr3: 47045102-47049760 Medicago truncatula
Medtr3g102120 2.0kb upstream 2.0kb upstream 2000 false chr3: 47045102-47047101 Medicago truncatula
Medtr3g102120 2.0kb downstream 2.0kb downstream 4659 true chr3: 47047102-47051760 Medicago truncatula
Medtr3g102120 2.0kb downstream 2.0kb downstream 2000 false chr3: 47049761-47051760 Medicago truncatula
Medtr3g102120 5.0kb upstream 5.0kb upstream 7659 true chr3: 47042102-47049760 Medicago truncatula
Medtr3g102120 5.0kb upstream 5.0kb upstream 5000 false chr3: 47042102-47047101 Medicago truncatula
Medtr3g102120 5.0kb downstream 5.0kb downstream 7659 true chr3: 47047102-47054760 Medicago truncatula
Medtr3g102120 5.0kb downstream 5.0kb downstream 5000 false chr3: 47049761-47054760 Medicago truncatula
Medtr3g102120 10.0kb upstream 10.0kb upstream 12659 true chr3: 47037102-47049760 Medicago truncatula
Medtr3g102120 10.0kb upstream 10.0kb upstream 10000 false chr3: 47037102-47047101 Medicago truncatula
Medtr3g102120 10.0kb downstream 10.0kb downstream 12659 true chr3: 47047102-47059760 Medicago truncatula
Medtr3g102120 10.0kb downstream 10.0kb downstream 10000 false chr3: 47049761-47059760 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310267 5265 Fabidae View MSA
124072225 5270 Rosid View MSA
123746722 5271 Pentapetalae View MSA
122787681 5272 Eudicot View MSA
122045013 5273 Angiosperm View MSA
121350191 5274 Embryophyte View MSA
123381613 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.611     High High
cufflinks 8.524        
cufflinks 9.033        
cufflinks 10.275     High  
cufflinks 7.128       Low
cufflinks 11.567     High  
cufflinks 23.828     High High
cufflinks 8.655        
cufflinks 17.12     High  

0 Strain