Gene : Medtr3g094110 M. truncatula Mt4.0v1
Description:  transposable element protein, putative Genomic Order:  5057
Name:  ? Medtr3g094110 Secondary Identifier:  ? PAC:31053709
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g094110 0.5kb upstream 0.5kb upstream 1424 true chr3: 42999658-43001081 Medicago truncatula
Medtr3g094110 0.5kb upstream 0.5kb upstream 500 false chr3: 43000582-43001081 Medicago truncatula
Medtr3g094110 0.5kb downstream 0.5kb downstream 1424 true chr3: 42999158-43000581 Medicago truncatula
Medtr3g094110 0.5kb downstream 0.5kb downstream 500 false chr3: 42999158-42999657 Medicago truncatula
Medtr3g094110 1.0kb upstream 1.0kb upstream 1924 true chr3: 42999658-43001581 Medicago truncatula
Medtr3g094110 1.0kb upstream 1.0kb upstream 1000 false chr3: 43000582-43001581 Medicago truncatula
Medtr3g094110 1.0kb downstream 1.0kb downstream 1924 true chr3: 42998658-43000581 Medicago truncatula
Medtr3g094110 1.0kb downstream 1.0kb downstream 1000 false chr3: 42998658-42999657 Medicago truncatula
Medtr3g094110 2.0kb upstream 2.0kb upstream 2924 true chr3: 42999658-43002581 Medicago truncatula
Medtr3g094110 2.0kb upstream 2.0kb upstream 2000 false chr3: 43000582-43002581 Medicago truncatula
Medtr3g094110 2.0kb downstream 2.0kb downstream 2924 true chr3: 42997658-43000581 Medicago truncatula
Medtr3g094110 2.0kb downstream 2.0kb downstream 2000 false chr3: 42997658-42999657 Medicago truncatula
Medtr3g094110 5.0kb upstream 5.0kb upstream 5924 true chr3: 42999658-43005581 Medicago truncatula
Medtr3g094110 5.0kb upstream 5.0kb upstream 5000 false chr3: 43000582-43005581 Medicago truncatula
Medtr3g094110 5.0kb downstream 5.0kb downstream 5924 true chr3: 42994658-43000581 Medicago truncatula
Medtr3g094110 5.0kb downstream 5.0kb downstream 5000 false chr3: 42994658-42999657 Medicago truncatula
Medtr3g094110 10.0kb upstream 10.0kb upstream 10924 true chr3: 42999658-43010581 Medicago truncatula
Medtr3g094110 10.0kb upstream 10.0kb upstream 10000 false chr3: 43000582-43010581 Medicago truncatula
Medtr3g094110 10.0kb downstream 10.0kb downstream 10924 true chr3: 42989658-43000581 Medicago truncatula
Medtr3g094110 10.0kb downstream 10.0kb downstream 10000 false chr3: 42989658-42999657 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
122288300 5265 Fabidae View MSA
124038150 5270 Rosid View MSA
123753404 5271 Pentapetalae View MSA
122796607 5272 Eudicot View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  

0 Strain