Protein Family : PF03732 - Retrotransposon gag protein (Retrotrans_gag) 122796607

Method ID:  5272 Method Name:  Eudicot
Sequence Alignment:  View MSA Member Count:  34

34 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29904.t000117 (1 of 26) PF03732 - Retrotransposon gag protein (Retrotrans_gag) R. communis v0.1 1086   29904: 838354-839439
Thecc1EG001704 (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) T. cacao v1.1 2149   scaffold_1: 8873430-8875578
Thecc1EG012596 Uncharacterized protein (22%U) T. cacao v1.1 13643   scaffold_3: 4134677-4148319
Thecc1EG027661 (1 of 139) PF03732 - Retrotransposon gag protein (Retrotrans_gag) T. cacao v1.1 31653   scaffold_6: 5921378-5953030
Glyma.06G277800 (1 of 3) PF03732 - Retrotransposon gag protein (Retrotrans_gag) G. max Wm82.a2.v1 1071   Chr06: 46963804-46964874
Medtr3g094110   M. truncatula Mt4.0v1 924   chr3: 42999658-43000581
Prupe.3G119500 (1 of 5) PF03732 - Retrotransposon gag protein (Retrotrans_gag) P. persica v2.1 1065   Pp03: 10418052-10419116
Prupe.3G119000 (1 of 5) PF03732 - Retrotransposon gag protein (Retrotrans_gag) P. persica v2.1 1062   Pp03: 10336096-10337157
Manes.03G153000 (1 of 13) PF03732 - Retrotransposon gag protein (Retrotrans_gag) M. esculenta v6.1 1038   Chromosome03: 24866241-24867278
Kalax.0104s0063 (1 of 25) PF03732 - Retrotransposon gag protein (Retrotrans_gag) K. laxiflora v1.1 1086   scaffold_104: 467630-468715
Kalax.0283s0048 (1 of 25) PF03732 - Retrotransposon gag protein (Retrotrans_gag) K. laxiflora v1.1 1080   scaffold_283: 377034-378113
Aqcoe4G047000 (1 of 2) PF03732 - Retrotransposon gag protein (Retrotrans_gag) A. coerulea v3.1 1469   Chr_04: 4172894-4174362
Kaladp0011s0354 (1 of 3) PF03732 - Retrotransposon gag protein (Retrotrans_gag) K. fedtschenkoi v1.1 1080   Scaffold_11: 2340758-2341837
Tp57577_TGAC_v2_gene770 (1 of 106) PF03732 - Retrotransposon gag protein (Retrotrans_gag) T. pratense v2 789   Tp57577_TGAC_v2_scaf_13543: 1-789
Tp57577_TGAC_v2_gene30974   T. pratense v2 922   Tp57577_TGAC_v2_scaf_16281: 226-1147
Tp57577_TGAC_v2_gene29200 (1 of 106) PF03732 - Retrotransposon gag protein (Retrotrans_gag) T. pratense v2 2189   Tp57577_TGAC_v2_LG3: 27133407-27135595
Tp57577_TGAC_v2_gene24565   T. pratense v2 1434   Tp57577_TGAC_v2_scaf_9556: 2-1435
Solyc07g025190.1 (1 of 15) PF03732 - Retrotransposon gag protein (Retrotrans_gag) S. lycopersicum ITAG2.4 1783   SL2.50ch07: 26531325-26533107
AUR62029875 (1 of 81) PF00153//PF03732 - Mitochondrial carrier protein (Mito_carr) // Retrotransposon gag protein (Retrotrans_gag) C. quinoa v1.0 1369   C_Quinoa_Scaffold_3500: 2509160-2510528
AUR62033010 (1 of 81) PF00153//PF03732 - Mitochondrial carrier protein (Mito_carr) // Retrotransposon gag protein (Retrotrans_gag) C. quinoa v1.0 10583   C_Quinoa_Scaffold_4206: 1824635-1835217
AUR62036886 (1 of 81) PF00153//PF03732 - Mitochondrial carrier protein (Mito_carr) // Retrotransposon gag protein (Retrotrans_gag) C. quinoa v1.0 810   C_Quinoa_Scaffold_3356: 873306-874115
AUR62031361 (1 of 81) PF00153//PF03732 - Mitochondrial carrier protein (Mito_carr) // Retrotransposon gag protein (Retrotrans_gag) C. quinoa v1.0 804   C_Quinoa_Scaffold_2963: 112990-113793
AUR62024034 (1 of 81) PF00153//PF03732 - Mitochondrial carrier protein (Mito_carr) // Retrotransposon gag protein (Retrotrans_gag) C. quinoa v1.0 1106   C_Quinoa_Scaffold_3389: 4083203-4084308
AUR62024032 (1 of 81) PF00153//PF03732 - Mitochondrial carrier protein (Mito_carr) // Retrotransposon gag protein (Retrotrans_gag) C. quinoa v1.0 1970   C_Quinoa_Scaffold_3389: 3984887-3986856
Phvul.008G165150   P. vulgaris v2.1 3870   Chr08: 45125431-45129300
MD15G1306600 (1 of 18) PF03732 - Retrotransposon gag protein (Retrotrans_gag) M. domestica v1.1 2835   Chr15: 30436492-30439326
MD10G1200800 (1 of 18) PF03732 - Retrotransposon gag protein (Retrotrans_gag) M. domestica v1.1 2849   Chr10: 29906852-29909700
MD08G1150100 (1 of 18) PF03732 - Retrotransposon gag protein (Retrotrans_gag) M. domestica v1.1 3778   Chr08: 15201230-15205007
MD02G1206700 (1 of 18) PF03732 - Retrotransposon gag protein (Retrotrans_gag) M. domestica v1.1 3417   Chr02: 20842450-20845866
HanXRQChr05g0135921 (1 of 179) PF03732 - Retrotransposon gag protein (Retrotrans_gag) H. annuus r1.2 3944   HanXRQChr05: 38977322-38981265

34 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29904.m003003 R. communis v0.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
Thecc1EG001704t1 T. cacao v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 3 5272 Eudicot
Thecc1EG027661t1 T. cacao v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 3 5272 Eudicot
Thecc1EG012596t1 T. cacao v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 3 5272 Eudicot
Glyma.06G277800.1.p G. max Wm82.a2.v1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
Medtr3g094110.1 M. truncatula Mt4.0v1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
Prupe.3G119500.1.p P. persica v2.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 2 5272 Eudicot
Manes.03G153000.1.p M. esculenta v6.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
Kalax.0104s0063.1.p K. laxiflora v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 2 5272 Eudicot
Aqcoe4G047000.1.p A. coerulea v3.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
Kaladp0011s0354.1.p K. fedtschenkoi v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
Tp57577_TGAC_v2_mRNA25413 T. pratense v2 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
Tp57577_TGAC_v2_mRNA30200 T. pratense v2 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
Tp57577_TGAC_v2_mRNA774 T. pratense v2 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
Solyc07g025190.1.1 S. lycopersicum ITAG2.4 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
AUR62033010-RA C. quinoa v1.0 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 6 5272 Eudicot
AUR62036886-RA C. quinoa v1.0 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 6 5272 Eudicot
AUR62024032-RA C. quinoa v1.0 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 6 5272 Eudicot
AUR62024034-RA C. quinoa v1.0 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 6 5272 Eudicot
AUR62031361-RA C. quinoa v1.0 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 6 5272 Eudicot
MD10G1200800 M. domestica v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
MD15G1306600 M. domestica v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
MD02G1206700 M. domestica v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
MD08G1150100 M. domestica v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
HanXRQChr05g0135921 H. annuus r1.2 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 1 5272 Eudicot
gene10219-v1.0-hybrid.t1 F. vesca v2.0.a2 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
gene10185-v1.0-hybrid.t1 F. vesca v2.0.a2 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
gene28977-v1.0-hybrid.t1 F. vesca v2.0.a2 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 4 5272 Eudicot
Prupe.3G119000.1.p P. persica v2.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 2 5272 Eudicot
Kalax.0283s0048.1.p K. laxiflora v1.1 122796607 PF03732 - Retrotransposon gag protein (Retrotrans_gag) 2 5272 Eudicot