Gene : Tp57577_TGAC_v2_gene29200 T. pratense v2
Defline:  (1 of 106) PF03732 - Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  3177
Name:  ? Tp57577_TGAC_v2_gene29200 Secondary Identifier:  ? PAC:35988104
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene29200 0.5kb upstream 0.5kb upstream 2689 true Tp57577_TGAC_v2_LG3: 27133407-27136095 Trifolium pratense
Tp57577_TGAC_v2_gene29200 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_LG3: 27135596-27136095 Trifolium pratense
Tp57577_TGAC_v2_gene29200 0.5kb downstream 0.5kb downstream 2689 true Tp57577_TGAC_v2_LG3: 27132907-27135595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_LG3: 27132907-27133406 Trifolium pratense
Tp57577_TGAC_v2_gene29200 1.0kb upstream 1.0kb upstream 3189 true Tp57577_TGAC_v2_LG3: 27133407-27136595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_LG3: 27135596-27136595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 1.0kb downstream 1.0kb downstream 3189 true Tp57577_TGAC_v2_LG3: 27132407-27135595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_LG3: 27132407-27133406 Trifolium pratense
Tp57577_TGAC_v2_gene29200 2.0kb upstream 2.0kb upstream 4189 true Tp57577_TGAC_v2_LG3: 27133407-27137595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_LG3: 27135596-27137595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 2.0kb downstream 2.0kb downstream 4189 true Tp57577_TGAC_v2_LG3: 27131407-27135595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_LG3: 27131407-27133406 Trifolium pratense
Tp57577_TGAC_v2_gene29200 5.0kb upstream 5.0kb upstream 7189 true Tp57577_TGAC_v2_LG3: 27133407-27140595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_LG3: 27135596-27140595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 5.0kb downstream 5.0kb downstream 7189 true Tp57577_TGAC_v2_LG3: 27128407-27135595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_LG3: 27128407-27133406 Trifolium pratense
Tp57577_TGAC_v2_gene29200 10.0kb upstream 10.0kb upstream 12189 true Tp57577_TGAC_v2_LG3: 27133407-27145595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_LG3: 27135596-27145595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 10.0kb downstream 10.0kb downstream 12189 true Tp57577_TGAC_v2_LG3: 27123407-27135595 Trifolium pratense
Tp57577_TGAC_v2_gene29200 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_LG3: 27123407-27133406 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
122288300 5265 Fabidae View MSA
124038150 5270 Rosid View MSA
123753404 5271 Pentapetalae View MSA
122796607 5272 Eudicot View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain