Gene : AUR62024032 C. quinoa v1.0

Defline:  (1 of 81) PF00153//PF03732 - Mitochondrial carrier protein (Mito_carr) // Retrotransposon gag protein (Retrotrans_gag) Genomic Order:  161
Name:  ? AUR62024032 Secondary Identifier:  ? PAC:36289968

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AUR62024032 0.5kb upstream 0.5kb upstream 2470 true C_Quinoa_Scaffold_3389: 3984887-3987356 Chenopodium quinoa
AUR62024032 0.5kb upstream 0.5kb upstream 500 false C_Quinoa_Scaffold_3389: 3986857-3987356 Chenopodium quinoa
AUR62024032 0.5kb downstream 0.5kb downstream 2470 true C_Quinoa_Scaffold_3389: 3984387-3986856 Chenopodium quinoa
AUR62024032 0.5kb downstream 0.5kb downstream 500 false C_Quinoa_Scaffold_3389: 3984387-3984886 Chenopodium quinoa
AUR62024032 1.0kb upstream 1.0kb upstream 2970 true C_Quinoa_Scaffold_3389: 3984887-3987856 Chenopodium quinoa
AUR62024032 1.0kb upstream 1.0kb upstream 1000 false C_Quinoa_Scaffold_3389: 3986857-3987856 Chenopodium quinoa
AUR62024032 1.0kb downstream 1.0kb downstream 2970 true C_Quinoa_Scaffold_3389: 3983887-3986856 Chenopodium quinoa
AUR62024032 1.0kb downstream 1.0kb downstream 1000 false C_Quinoa_Scaffold_3389: 3983887-3984886 Chenopodium quinoa
AUR62024032 2.0kb upstream 2.0kb upstream 3970 true C_Quinoa_Scaffold_3389: 3984887-3988856 Chenopodium quinoa
AUR62024032 2.0kb upstream 2.0kb upstream 2000 false C_Quinoa_Scaffold_3389: 3986857-3988856 Chenopodium quinoa
AUR62024032 2.0kb downstream 2.0kb downstream 3970 true C_Quinoa_Scaffold_3389: 3982887-3986856 Chenopodium quinoa
AUR62024032 2.0kb downstream 2.0kb downstream 2000 false C_Quinoa_Scaffold_3389: 3982887-3984886 Chenopodium quinoa
AUR62024032 5.0kb upstream 5.0kb upstream 6970 true C_Quinoa_Scaffold_3389: 3984887-3991856 Chenopodium quinoa
AUR62024032 5.0kb upstream 5.0kb upstream 5000 false C_Quinoa_Scaffold_3389: 3986857-3991856 Chenopodium quinoa
AUR62024032 5.0kb downstream 5.0kb downstream 6970 true C_Quinoa_Scaffold_3389: 3979887-3986856 Chenopodium quinoa
AUR62024032 5.0kb downstream 5.0kb downstream 5000 false C_Quinoa_Scaffold_3389: 3979887-3984886 Chenopodium quinoa
AUR62024032 10.0kb upstream 10.0kb upstream 11970 true C_Quinoa_Scaffold_3389: 3984887-3996856 Chenopodium quinoa
AUR62024032 10.0kb upstream 10.0kb upstream 10000 false C_Quinoa_Scaffold_3389: 3986857-3996856 Chenopodium quinoa
AUR62024032 10.0kb downstream 10.0kb downstream 11970 true C_Quinoa_Scaffold_3389: 3974887-3986856 Chenopodium quinoa
AUR62024032 10.0kb downstream 10.0kb downstream 10000 false C_Quinoa_Scaffold_3389: 3974887-3984886 Chenopodium quinoa

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029860 5273 Angiosperm View MSA
123753404 5271 Pentapetalae View MSA
122796607 5272 Eudicot View MSA
121350456 5274 Embryophyte View MSA
123381742 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain