Gene : Medtr3g096200 M. truncatula Mt4.0v1
Defline:  (1 of 18) 2.4.1.34 - 1,3-beta-glucan synthase / UDP-glucose-1,3-beta-D-glucan glucosyltransferase Description:  glucan synthase-like protein
Genomic Order:  5180 Name:  ? Medtr3g096200
Secondary Identifier:  ? PAC:31059093
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6773 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g096200 0.5kb upstream 0.5kb upstream 17003 true chr3: 43952945-43969947 Medicago truncatula
Medtr3g096200 0.5kb upstream 0.5kb upstream 500 false chr3: 43969448-43969947 Medicago truncatula
Medtr3g096200 0.5kb downstream 0.5kb downstream 17003 true chr3: 43952445-43969447 Medicago truncatula
Medtr3g096200 0.5kb downstream 0.5kb downstream 500 false chr3: 43952445-43952944 Medicago truncatula
Medtr3g096200 1.0kb upstream 1.0kb upstream 17503 true chr3: 43952945-43970447 Medicago truncatula
Medtr3g096200 1.0kb upstream 1.0kb upstream 1000 false chr3: 43969448-43970447 Medicago truncatula
Medtr3g096200 1.0kb downstream 1.0kb downstream 17503 true chr3: 43951945-43969447 Medicago truncatula
Medtr3g096200 1.0kb downstream 1.0kb downstream 1000 false chr3: 43951945-43952944 Medicago truncatula
Medtr3g096200 2.0kb upstream 2.0kb upstream 18503 true chr3: 43952945-43971447 Medicago truncatula
Medtr3g096200 2.0kb upstream 2.0kb upstream 2000 false chr3: 43969448-43971447 Medicago truncatula
Medtr3g096200 2.0kb downstream 2.0kb downstream 18503 true chr3: 43950945-43969447 Medicago truncatula
Medtr3g096200 2.0kb downstream 2.0kb downstream 2000 false chr3: 43950945-43952944 Medicago truncatula
Medtr3g096200 5.0kb upstream 5.0kb upstream 21503 true chr3: 43952945-43974447 Medicago truncatula
Medtr3g096200 5.0kb upstream 5.0kb upstream 5000 false chr3: 43969448-43974447 Medicago truncatula
Medtr3g096200 5.0kb downstream 5.0kb downstream 21503 true chr3: 43947945-43969447 Medicago truncatula
Medtr3g096200 5.0kb downstream 5.0kb downstream 5000 false chr3: 43947945-43952944 Medicago truncatula
Medtr3g096200 10.0kb upstream 10.0kb upstream 26503 true chr3: 43952945-43979447 Medicago truncatula
Medtr3g096200 10.0kb upstream 10.0kb upstream 10000 false chr3: 43969448-43979447 Medicago truncatula
Medtr3g096200 10.0kb downstream 10.0kb downstream 26503 true chr3: 43942945-43969447 Medicago truncatula
Medtr3g096200 10.0kb downstream 10.0kb downstream 10000 false chr3: 43942945-43952944 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314724 5265 Fabidae View MSA
124065172 5270 Rosid View MSA
123736428 5271 Pentapetalae View MSA
122796898 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.129        
cufflinks 0.352        
cufflinks 0.375        
cufflinks 0.048     Low Low
cufflinks 0.498       High
cufflinks 0.081     Low  
cufflinks 0.04     Low Low
cufflinks 0.355        
cufflinks 0.062     Low  

0 Strain