Gene : Medtr3g095810 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11489 - 40S RIBOSOMAL PROTEIN SA Description:  40S ribosomal SA-like protein
Genomic Order:  5156 Name:  ? Medtr3g095810
Secondary Identifier:  ? PAC:31059258
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g095810 0.5kb upstream 0.5kb upstream 3169 true chr3: 43782199-43785367 Medicago truncatula
Medtr3g095810 0.5kb upstream 0.5kb upstream 500 false chr3: 43782199-43782698 Medicago truncatula
Medtr3g095810 0.5kb downstream 0.5kb downstream 3169 true chr3: 43782699-43785867 Medicago truncatula
Medtr3g095810 0.5kb downstream 0.5kb downstream 500 false chr3: 43785368-43785867 Medicago truncatula
Medtr3g095810 1.0kb upstream 1.0kb upstream 3669 true chr3: 43781699-43785367 Medicago truncatula
Medtr3g095810 1.0kb upstream 1.0kb upstream 1000 false chr3: 43781699-43782698 Medicago truncatula
Medtr3g095810 1.0kb downstream 1.0kb downstream 3669 true chr3: 43782699-43786367 Medicago truncatula
Medtr3g095810 1.0kb downstream 1.0kb downstream 1000 false chr3: 43785368-43786367 Medicago truncatula
Medtr3g095810 2.0kb upstream 2.0kb upstream 4669 true chr3: 43780699-43785367 Medicago truncatula
Medtr3g095810 2.0kb upstream 2.0kb upstream 2000 false chr3: 43780699-43782698 Medicago truncatula
Medtr3g095810 2.0kb downstream 2.0kb downstream 4669 true chr3: 43782699-43787367 Medicago truncatula
Medtr3g095810 2.0kb downstream 2.0kb downstream 2000 false chr3: 43785368-43787367 Medicago truncatula
Medtr3g095810 5.0kb upstream 5.0kb upstream 7669 true chr3: 43777699-43785367 Medicago truncatula
Medtr3g095810 5.0kb upstream 5.0kb upstream 5000 false chr3: 43777699-43782698 Medicago truncatula
Medtr3g095810 5.0kb downstream 5.0kb downstream 7669 true chr3: 43782699-43790367 Medicago truncatula
Medtr3g095810 5.0kb downstream 5.0kb downstream 5000 false chr3: 43785368-43790367 Medicago truncatula
Medtr3g095810 10.0kb upstream 10.0kb upstream 12669 true chr3: 43772699-43785367 Medicago truncatula
Medtr3g095810 10.0kb upstream 10.0kb upstream 10000 false chr3: 43772699-43782698 Medicago truncatula
Medtr3g095810 10.0kb downstream 10.0kb downstream 12669 true chr3: 43782699-43795367 Medicago truncatula
Medtr3g095810 10.0kb downstream 10.0kb downstream 10000 false chr3: 43785368-43795367 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306925 5265 Fabidae View MSA
124069184 5270 Rosid View MSA
123743040 5271 Pentapetalae View MSA
122796033 5272 Eudicot View MSA
122048402 5273 Angiosperm View MSA
121346031 5274 Embryophyte View MSA
123424876 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.606     High  
cufflinks 25.958     High Low
cufflinks 30.956     High  
cufflinks 134.581     High High
cufflinks 43.898     High  
cufflinks 92.784     High High
cufflinks 37.248     High  
cufflinks 32.994     High  
cufflinks 65.358     High  

0 Strain