Gene : Medtr3g096990 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31580:SF5 - FILAMENT-LIKE PLANT PROTEIN 3 Description:  filament-like plant protein
Genomic Order:  5251 Name:  ? Medtr3g096990
Secondary Identifier:  ? PAC:31053942
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g096990 0.5kb upstream 0.5kb upstream 4741 true chr3: 44424567-44429307 Medicago truncatula
Medtr3g096990 0.5kb upstream 0.5kb upstream 500 false chr3: 44428808-44429307 Medicago truncatula
Medtr3g096990 0.5kb downstream 0.5kb downstream 4741 true chr3: 44424067-44428807 Medicago truncatula
Medtr3g096990 0.5kb downstream 0.5kb downstream 500 false chr3: 44424067-44424566 Medicago truncatula
Medtr3g096990 1.0kb upstream 1.0kb upstream 5241 true chr3: 44424567-44429807 Medicago truncatula
Medtr3g096990 1.0kb upstream 1.0kb upstream 1000 false chr3: 44428808-44429807 Medicago truncatula
Medtr3g096990 1.0kb downstream 1.0kb downstream 5241 true chr3: 44423567-44428807 Medicago truncatula
Medtr3g096990 1.0kb downstream 1.0kb downstream 1000 false chr3: 44423567-44424566 Medicago truncatula
Medtr3g096990 2.0kb upstream 2.0kb upstream 6241 true chr3: 44424567-44430807 Medicago truncatula
Medtr3g096990 2.0kb upstream 2.0kb upstream 2000 false chr3: 44428808-44430807 Medicago truncatula
Medtr3g096990 2.0kb downstream 2.0kb downstream 6241 true chr3: 44422567-44428807 Medicago truncatula
Medtr3g096990 2.0kb downstream 2.0kb downstream 2000 false chr3: 44422567-44424566 Medicago truncatula
Medtr3g096990 5.0kb upstream 5.0kb upstream 9241 true chr3: 44424567-44433807 Medicago truncatula
Medtr3g096990 5.0kb upstream 5.0kb upstream 5000 false chr3: 44428808-44433807 Medicago truncatula
Medtr3g096990 5.0kb downstream 5.0kb downstream 9241 true chr3: 44419567-44428807 Medicago truncatula
Medtr3g096990 5.0kb downstream 5.0kb downstream 5000 false chr3: 44419567-44424566 Medicago truncatula
Medtr3g096990 10.0kb upstream 10.0kb upstream 14241 true chr3: 44424567-44438807 Medicago truncatula
Medtr3g096990 10.0kb upstream 10.0kb upstream 10000 false chr3: 44428808-44438807 Medicago truncatula
Medtr3g096990 10.0kb downstream 10.0kb downstream 14241 true chr3: 44414567-44428807 Medicago truncatula
Medtr3g096990 10.0kb downstream 10.0kb downstream 10000 false chr3: 44414567-44424566 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298382 5265 Fabidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.185        
cufflinks 1.051        
cufflinks 1.186        
cufflinks 0.061     Low Low
cufflinks 1.597       High
cufflinks 0.257        
cufflinks 0.111        
cufflinks 1.187        
cufflinks 0.156        

0 Strain