Gene : Medtr3g098310 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Description:  ATP-dependent Clp protease
Genomic Order:  5308 Name:  ? Medtr3g098310
Secondary Identifier:  ? PAC:31057598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g098310 0.5kb upstream 0.5kb upstream 7655 true chr3: 44871095-44878749 Medicago truncatula
Medtr3g098310 0.5kb upstream 0.5kb upstream 500 false chr3: 44878250-44878749 Medicago truncatula
Medtr3g098310 0.5kb downstream 0.5kb downstream 7655 true chr3: 44870595-44878249 Medicago truncatula
Medtr3g098310 0.5kb downstream 0.5kb downstream 500 false chr3: 44870595-44871094 Medicago truncatula
Medtr3g098310 1.0kb upstream 1.0kb upstream 8155 true chr3: 44871095-44879249 Medicago truncatula
Medtr3g098310 1.0kb upstream 1.0kb upstream 1000 false chr3: 44878250-44879249 Medicago truncatula
Medtr3g098310 1.0kb downstream 1.0kb downstream 8155 true chr3: 44870095-44878249 Medicago truncatula
Medtr3g098310 1.0kb downstream 1.0kb downstream 1000 false chr3: 44870095-44871094 Medicago truncatula
Medtr3g098310 2.0kb upstream 2.0kb upstream 9155 true chr3: 44871095-44880249 Medicago truncatula
Medtr3g098310 2.0kb upstream 2.0kb upstream 2000 false chr3: 44878250-44880249 Medicago truncatula
Medtr3g098310 2.0kb downstream 2.0kb downstream 9155 true chr3: 44869095-44878249 Medicago truncatula
Medtr3g098310 2.0kb downstream 2.0kb downstream 2000 false chr3: 44869095-44871094 Medicago truncatula
Medtr3g098310 5.0kb upstream 5.0kb upstream 12155 true chr3: 44871095-44883249 Medicago truncatula
Medtr3g098310 5.0kb upstream 5.0kb upstream 5000 false chr3: 44878250-44883249 Medicago truncatula
Medtr3g098310 5.0kb downstream 5.0kb downstream 12155 true chr3: 44866095-44878249 Medicago truncatula
Medtr3g098310 5.0kb downstream 5.0kb downstream 5000 false chr3: 44866095-44871094 Medicago truncatula
Medtr3g098310 10.0kb upstream 10.0kb upstream 17155 true chr3: 44871095-44888249 Medicago truncatula
Medtr3g098310 10.0kb upstream 10.0kb upstream 10000 false chr3: 44878250-44888249 Medicago truncatula
Medtr3g098310 10.0kb downstream 10.0kb downstream 17155 true chr3: 44861095-44878249 Medicago truncatula
Medtr3g098310 10.0kb downstream 10.0kb downstream 10000 false chr3: 44861095-44871094 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041323 5273 Angiosperm View MSA
122299430 5265 Fabidae View MSA
124066848 5270 Rosid View MSA
123740697 5271 Pentapetalae View MSA
122787992 5272 Eudicot View MSA
121345985 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.125        
cufflinks 9.407       High
cufflinks 10.77     High High
cufflinks 0.394       Low
cufflinks 7.534        
cufflinks 0.339       Low
cufflinks 0.826        
cufflinks 9.082     High High
cufflinks 0.636        

0 Strain