Gene : Medtr3g089090 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN Description:  EF hand calcium-binding family protein
Genomic Order:  3790 Name:  ? Medtr3g089090
Secondary Identifier:  ? PAC:31058401
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g089090 0.5kb upstream 0.5kb upstream 1615 true chr3: 33930977-33932591 Medicago truncatula
Medtr3g089090 0.5kb upstream 0.5kb upstream 500 false chr3: 33932092-33932591 Medicago truncatula
Medtr3g089090 0.5kb downstream 0.5kb downstream 1615 true chr3: 33930477-33932091 Medicago truncatula
Medtr3g089090 0.5kb downstream 0.5kb downstream 500 false chr3: 33930477-33930976 Medicago truncatula
Medtr3g089090 1.0kb upstream 1.0kb upstream 2115 true chr3: 33930977-33933091 Medicago truncatula
Medtr3g089090 1.0kb upstream 1.0kb upstream 1000 false chr3: 33932092-33933091 Medicago truncatula
Medtr3g089090 1.0kb downstream 1.0kb downstream 2115 true chr3: 33929977-33932091 Medicago truncatula
Medtr3g089090 1.0kb downstream 1.0kb downstream 1000 false chr3: 33929977-33930976 Medicago truncatula
Medtr3g089090 2.0kb upstream 2.0kb upstream 3115 true chr3: 33930977-33934091 Medicago truncatula
Medtr3g089090 2.0kb upstream 2.0kb upstream 2000 false chr3: 33932092-33934091 Medicago truncatula
Medtr3g089090 2.0kb downstream 2.0kb downstream 3115 true chr3: 33928977-33932091 Medicago truncatula
Medtr3g089090 2.0kb downstream 2.0kb downstream 2000 false chr3: 33928977-33930976 Medicago truncatula
Medtr3g089090 5.0kb upstream 5.0kb upstream 6115 true chr3: 33930977-33937091 Medicago truncatula
Medtr3g089090 5.0kb upstream 5.0kb upstream 5000 false chr3: 33932092-33937091 Medicago truncatula
Medtr3g089090 5.0kb downstream 5.0kb downstream 6115 true chr3: 33925977-33932091 Medicago truncatula
Medtr3g089090 5.0kb downstream 5.0kb downstream 5000 false chr3: 33925977-33930976 Medicago truncatula
Medtr3g089090 10.0kb upstream 10.0kb upstream 11115 true chr3: 33930977-33942091 Medicago truncatula
Medtr3g089090 10.0kb upstream 10.0kb upstream 10000 false chr3: 33932092-33942091 Medicago truncatula
Medtr3g089090 10.0kb downstream 10.0kb downstream 11115 true chr3: 33920977-33932091 Medicago truncatula
Medtr3g089090 10.0kb downstream 10.0kb downstream 10000 false chr3: 33920977-33930976 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309759 5265 Fabidae View MSA
124071613 5270 Rosid View MSA
123747964 5271 Pentapetalae View MSA
122795822 5272 Eudicot View MSA
122046502 5273 Angiosperm View MSA
121351910 5274 Embryophyte View MSA
123382405 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 177.417     High High
cufflinks 11.342     High Low
cufflinks 23.901     High  
cufflinks 47.866     High  
cufflinks 15.472     High  
cufflinks 135.666     High High
cufflinks 118.777     High  
cufflinks 8.957       Low
cufflinks 56.719     High  

0 Strain