Gene : Medtr3g091090 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.5.1.22 - Spermine synthase / Spermidine aminopropyltransferase Description:  spermine/spermidine synthase
Genomic Order:  4836 Name:  ? Medtr3g091090
Secondary Identifier:  ? PAC:31061061
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ARGSPECAT-PWY Medicago truncatula pathologic  
Mtruncatula BSUBPOLYAMSYN-PWY Medicago truncatula pathologic  
Mtruncatula POLYAMINSYN3-PWY Medicago truncatula pathologic  
Mtruncatula PWY-7528 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g091090 0.5kb upstream 0.5kb upstream 6115 true chr3: 41398064-41404178 Medicago truncatula
Medtr3g091090 0.5kb upstream 0.5kb upstream 500 false chr3: 41403679-41404178 Medicago truncatula
Medtr3g091090 0.5kb downstream 0.5kb downstream 6115 true chr3: 41397564-41403678 Medicago truncatula
Medtr3g091090 0.5kb downstream 0.5kb downstream 500 false chr3: 41397564-41398063 Medicago truncatula
Medtr3g091090 1.0kb upstream 1.0kb upstream 6615 true chr3: 41398064-41404678 Medicago truncatula
Medtr3g091090 1.0kb upstream 1.0kb upstream 1000 false chr3: 41403679-41404678 Medicago truncatula
Medtr3g091090 1.0kb downstream 1.0kb downstream 6615 true chr3: 41397064-41403678 Medicago truncatula
Medtr3g091090 1.0kb downstream 1.0kb downstream 1000 false chr3: 41397064-41398063 Medicago truncatula
Medtr3g091090 2.0kb upstream 2.0kb upstream 7615 true chr3: 41398064-41405678 Medicago truncatula
Medtr3g091090 2.0kb upstream 2.0kb upstream 2000 false chr3: 41403679-41405678 Medicago truncatula
Medtr3g091090 2.0kb downstream 2.0kb downstream 7615 true chr3: 41396064-41403678 Medicago truncatula
Medtr3g091090 2.0kb downstream 2.0kb downstream 2000 false chr3: 41396064-41398063 Medicago truncatula
Medtr3g091090 5.0kb upstream 5.0kb upstream 10615 true chr3: 41398064-41408678 Medicago truncatula
Medtr3g091090 5.0kb upstream 5.0kb upstream 5000 false chr3: 41403679-41408678 Medicago truncatula
Medtr3g091090 5.0kb downstream 5.0kb downstream 10615 true chr3: 41393064-41403678 Medicago truncatula
Medtr3g091090 5.0kb downstream 5.0kb downstream 5000 false chr3: 41393064-41398063 Medicago truncatula
Medtr3g091090 10.0kb upstream 10.0kb upstream 15615 true chr3: 41398064-41413678 Medicago truncatula
Medtr3g091090 10.0kb upstream 10.0kb upstream 10000 false chr3: 41403679-41413678 Medicago truncatula
Medtr3g091090 10.0kb downstream 10.0kb downstream 15615 true chr3: 41388064-41403678 Medicago truncatula
Medtr3g091090 10.0kb downstream 10.0kb downstream 10000 false chr3: 41388064-41398063 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304285 5265 Fabidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43        
cufflinks 2.344        
cufflinks 3.434       High
cufflinks 2.108        
cufflinks 2.706        
cufflinks 1.043       Low
cufflinks 1.288       Low
cufflinks 3.039       High
cufflinks 1.908        

0 Strain