Gene : Medtr3g092730 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12882 - SUPPRESSOR OF TY 4 Description:  transcription elongation factor SPT4-like protein
Genomic Order:  4959 Name:  ? Medtr3g092730
Secondary Identifier:  ? PAC:31055957
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g092730 0.5kb upstream 0.5kb upstream 7481 true chr3: 42373303-42380783 Medicago truncatula
Medtr3g092730 0.5kb upstream 0.5kb upstream 500 false chr3: 42373303-42373802 Medicago truncatula
Medtr3g092730 0.5kb downstream 0.5kb downstream 7481 true chr3: 42373803-42381283 Medicago truncatula
Medtr3g092730 0.5kb downstream 0.5kb downstream 500 false chr3: 42380784-42381283 Medicago truncatula
Medtr3g092730 1.0kb upstream 1.0kb upstream 7981 true chr3: 42372803-42380783 Medicago truncatula
Medtr3g092730 1.0kb upstream 1.0kb upstream 1000 false chr3: 42372803-42373802 Medicago truncatula
Medtr3g092730 1.0kb downstream 1.0kb downstream 7981 true chr3: 42373803-42381783 Medicago truncatula
Medtr3g092730 1.0kb downstream 1.0kb downstream 1000 false chr3: 42380784-42381783 Medicago truncatula
Medtr3g092730 2.0kb upstream 2.0kb upstream 8981 true chr3: 42371803-42380783 Medicago truncatula
Medtr3g092730 2.0kb upstream 2.0kb upstream 2000 false chr3: 42371803-42373802 Medicago truncatula
Medtr3g092730 2.0kb downstream 2.0kb downstream 8981 true chr3: 42373803-42382783 Medicago truncatula
Medtr3g092730 2.0kb downstream 2.0kb downstream 2000 false chr3: 42380784-42382783 Medicago truncatula
Medtr3g092730 5.0kb upstream 5.0kb upstream 11981 true chr3: 42368803-42380783 Medicago truncatula
Medtr3g092730 5.0kb upstream 5.0kb upstream 5000 false chr3: 42368803-42373802 Medicago truncatula
Medtr3g092730 5.0kb downstream 5.0kb downstream 11981 true chr3: 42373803-42385783 Medicago truncatula
Medtr3g092730 5.0kb downstream 5.0kb downstream 5000 false chr3: 42380784-42385783 Medicago truncatula
Medtr3g092730 10.0kb upstream 10.0kb upstream 16981 true chr3: 42363803-42380783 Medicago truncatula
Medtr3g092730 10.0kb upstream 10.0kb upstream 10000 false chr3: 42363803-42373802 Medicago truncatula
Medtr3g092730 10.0kb downstream 10.0kb downstream 16981 true chr3: 42373803-42390783 Medicago truncatula
Medtr3g092730 10.0kb downstream 10.0kb downstream 10000 false chr3: 42380784-42390783 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302293 5265 Fabidae View MSA
124065394 5270 Rosid View MSA
123740657 5271 Pentapetalae View MSA
122786663 5272 Eudicot View MSA
122042342 5273 Angiosperm View MSA
121345840 5274 Embryophyte View MSA
123426410 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.623       Low
cufflinks 3.043        
cufflinks 3.506       High
cufflinks 3.026        
cufflinks 3.588       High
cufflinks 1.751        
cufflinks 1.496       Low
cufflinks 3.208        
cufflinks 1.934        

0 Strain