Gene : Medtr3g093540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13355:SF12 - GCN5-RELATED N-ACETYLTRANSFERASE (GNAT) FAMILY PROTEIN Description:  acetyltransferase (GNAT) domain protein
Genomic Order:  5014 Name:  ? Medtr3g093540
Secondary Identifier:  ? PAC:31057640
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula UDPNACETYLGALSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g093540 0.5kb upstream 0.5kb upstream 2931 true chr3: 42746450-42749380 Medicago truncatula
Medtr3g093540 0.5kb upstream 0.5kb upstream 500 false chr3: 42746450-42746949 Medicago truncatula
Medtr3g093540 0.5kb downstream 0.5kb downstream 2931 true chr3: 42746950-42749880 Medicago truncatula
Medtr3g093540 0.5kb downstream 0.5kb downstream 500 false chr3: 42749381-42749880 Medicago truncatula
Medtr3g093540 1.0kb upstream 1.0kb upstream 3431 true chr3: 42745950-42749380 Medicago truncatula
Medtr3g093540 1.0kb upstream 1.0kb upstream 1000 false chr3: 42745950-42746949 Medicago truncatula
Medtr3g093540 1.0kb downstream 1.0kb downstream 3431 true chr3: 42746950-42750380 Medicago truncatula
Medtr3g093540 1.0kb downstream 1.0kb downstream 1000 false chr3: 42749381-42750380 Medicago truncatula
Medtr3g093540 2.0kb upstream 2.0kb upstream 4431 true chr3: 42744950-42749380 Medicago truncatula
Medtr3g093540 2.0kb upstream 2.0kb upstream 2000 false chr3: 42744950-42746949 Medicago truncatula
Medtr3g093540 2.0kb downstream 2.0kb downstream 4431 true chr3: 42746950-42751380 Medicago truncatula
Medtr3g093540 2.0kb downstream 2.0kb downstream 2000 false chr3: 42749381-42751380 Medicago truncatula
Medtr3g093540 5.0kb upstream 5.0kb upstream 7431 true chr3: 42741950-42749380 Medicago truncatula
Medtr3g093540 5.0kb upstream 5.0kb upstream 5000 false chr3: 42741950-42746949 Medicago truncatula
Medtr3g093540 5.0kb downstream 5.0kb downstream 7431 true chr3: 42746950-42754380 Medicago truncatula
Medtr3g093540 5.0kb downstream 5.0kb downstream 5000 false chr3: 42749381-42754380 Medicago truncatula
Medtr3g093540 10.0kb upstream 10.0kb upstream 12431 true chr3: 42736950-42749380 Medicago truncatula
Medtr3g093540 10.0kb upstream 10.0kb upstream 10000 false chr3: 42736950-42746949 Medicago truncatula
Medtr3g093540 10.0kb downstream 10.0kb downstream 12431 true chr3: 42746950-42759380 Medicago truncatula
Medtr3g093540 10.0kb downstream 10.0kb downstream 10000 false chr3: 42749381-42759380 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310220 5265 Fabidae View MSA
124063813 5270 Rosid View MSA
123749165 5271 Pentapetalae View MSA
122794919 5272 Eudicot View MSA
122047532 5273 Angiosperm View MSA
123428893 5275 Viridiplantae View MSA
121347611 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.892       Low
cufflinks 3.537        
cufflinks 4.836        
cufflinks 2.533        
cufflinks 4.633        
cufflinks 0.77       Low
cufflinks 2.009        
cufflinks 5.276       High
cufflinks 1.234        

0 Strain