Gene : Medtr3g085850 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10836:SF59 - GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE GAPC1, CYTOSOLIC Description:  glyceraldehyde-3-phosphate dehydrogenase
Genomic Order:  4488 Name:  ? Medtr3g085850
Secondary Identifier:  ? PAC:31056637
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula ANAEROFRUCAT-PWY Medicago truncatula pathologic  
Mtruncatula ANAGLYCOLYSIS-PWY Medicago truncatula pathologic  
Mtruncatula GLUCONEO-PWY Medicago truncatula pathologic  
Mtruncatula PWY-1042 Medicago truncatula pathologic  
Mtruncatula PWY-5464 Medicago truncatula pathologic  
Mtruncatula PWY66-399 Medicago truncatula pathologic  
Mtruncatula SUCSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g085850 0.5kb upstream 0.5kb upstream 3513 true chr3: 38845146-38848658 Medicago truncatula
Medtr3g085850 0.5kb upstream 0.5kb upstream 500 false chr3: 38848159-38848658 Medicago truncatula
Medtr3g085850 0.5kb downstream 0.5kb downstream 3513 true chr3: 38844646-38848158 Medicago truncatula
Medtr3g085850 0.5kb downstream 0.5kb downstream 500 false chr3: 38844646-38845145 Medicago truncatula
Medtr3g085850 1.0kb upstream 1.0kb upstream 4013 true chr3: 38845146-38849158 Medicago truncatula
Medtr3g085850 1.0kb upstream 1.0kb upstream 1000 false chr3: 38848159-38849158 Medicago truncatula
Medtr3g085850 1.0kb downstream 1.0kb downstream 4013 true chr3: 38844146-38848158 Medicago truncatula
Medtr3g085850 1.0kb downstream 1.0kb downstream 1000 false chr3: 38844146-38845145 Medicago truncatula
Medtr3g085850 2.0kb upstream 2.0kb upstream 5013 true chr3: 38845146-38850158 Medicago truncatula
Medtr3g085850 2.0kb upstream 2.0kb upstream 2000 false chr3: 38848159-38850158 Medicago truncatula
Medtr3g085850 2.0kb downstream 2.0kb downstream 5013 true chr3: 38843146-38848158 Medicago truncatula
Medtr3g085850 2.0kb downstream 2.0kb downstream 2000 false chr3: 38843146-38845145 Medicago truncatula
Medtr3g085850 5.0kb upstream 5.0kb upstream 8013 true chr3: 38845146-38853158 Medicago truncatula
Medtr3g085850 5.0kb upstream 5.0kb upstream 5000 false chr3: 38848159-38853158 Medicago truncatula
Medtr3g085850 5.0kb downstream 5.0kb downstream 8013 true chr3: 38840146-38848158 Medicago truncatula
Medtr3g085850 5.0kb downstream 5.0kb downstream 5000 false chr3: 38840146-38845145 Medicago truncatula
Medtr3g085850 10.0kb upstream 10.0kb upstream 13013 true chr3: 38845146-38858158 Medicago truncatula
Medtr3g085850 10.0kb upstream 10.0kb upstream 10000 false chr3: 38848159-38858158 Medicago truncatula
Medtr3g085850 10.0kb downstream 10.0kb downstream 13013 true chr3: 38835146-38848158 Medicago truncatula
Medtr3g085850 10.0kb downstream 10.0kb downstream 10000 false chr3: 38835146-38845145 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314378 5265 Fabidae View MSA
124074393 5270 Rosid View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 595.692     High  
cufflinks 25.365     High  
cufflinks 16.61     High Low
cufflinks 600.57     High  
cufflinks 23.267     High  
cufflinks 339.597     High  
cufflinks 581.75     High  
cufflinks 15.99     High Low
cufflinks 644.715     High  

0 Strain