Gene : Medtr3g086330 M. truncatula Mt4.0v1
Defline:  (1 of 25) PTHR11353 - CHAPERONIN Description:  TCP-1/cpn60 chaperonin family protein
Genomic Order:  4524 Name:  ? Medtr3g086330
Secondary Identifier:  ? PAC:31056033
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g086330 0.5kb upstream 0.5kb upstream 5010 true chr3: 39085809-39090818 Medicago truncatula
Medtr3g086330 0.5kb upstream 0.5kb upstream 500 false chr3: 39090319-39090818 Medicago truncatula
Medtr3g086330 0.5kb downstream 0.5kb downstream 5010 true chr3: 39085309-39090318 Medicago truncatula
Medtr3g086330 0.5kb downstream 0.5kb downstream 500 false chr3: 39085309-39085808 Medicago truncatula
Medtr3g086330 1.0kb upstream 1.0kb upstream 5510 true chr3: 39085809-39091318 Medicago truncatula
Medtr3g086330 1.0kb upstream 1.0kb upstream 1000 false chr3: 39090319-39091318 Medicago truncatula
Medtr3g086330 1.0kb downstream 1.0kb downstream 5510 true chr3: 39084809-39090318 Medicago truncatula
Medtr3g086330 1.0kb downstream 1.0kb downstream 1000 false chr3: 39084809-39085808 Medicago truncatula
Medtr3g086330 2.0kb upstream 2.0kb upstream 6510 true chr3: 39085809-39092318 Medicago truncatula
Medtr3g086330 2.0kb upstream 2.0kb upstream 2000 false chr3: 39090319-39092318 Medicago truncatula
Medtr3g086330 2.0kb downstream 2.0kb downstream 6510 true chr3: 39083809-39090318 Medicago truncatula
Medtr3g086330 2.0kb downstream 2.0kb downstream 2000 false chr3: 39083809-39085808 Medicago truncatula
Medtr3g086330 5.0kb upstream 5.0kb upstream 9510 true chr3: 39085809-39095318 Medicago truncatula
Medtr3g086330 5.0kb upstream 5.0kb upstream 5000 false chr3: 39090319-39095318 Medicago truncatula
Medtr3g086330 5.0kb downstream 5.0kb downstream 9510 true chr3: 39080809-39090318 Medicago truncatula
Medtr3g086330 5.0kb downstream 5.0kb downstream 5000 false chr3: 39080809-39085808 Medicago truncatula
Medtr3g086330 10.0kb upstream 10.0kb upstream 14510 true chr3: 39085809-39100318 Medicago truncatula
Medtr3g086330 10.0kb upstream 10.0kb upstream 10000 false chr3: 39090319-39100318 Medicago truncatula
Medtr3g086330 10.0kb downstream 10.0kb downstream 14510 true chr3: 39075809-39090318 Medicago truncatula
Medtr3g086330 10.0kb downstream 10.0kb downstream 10000 false chr3: 39075809-39085808 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306486 5265 Fabidae View MSA
124068195 5270 Rosid View MSA
123739090 5271 Pentapetalae View MSA
122792390 5272 Eudicot View MSA
122043511 5273 Angiosperm View MSA
121350582 5274 Embryophyte View MSA
123425092 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.996     High  
cufflinks 16.543     High  
cufflinks 16.952     High  
cufflinks 16.607     High  
cufflinks 30.423     High High
cufflinks 4.006       Low
cufflinks 17.84     High  
cufflinks 16.72     High  
cufflinks 32.576     High High

0 Strain