Gene : Medtr3g087350 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11384//PTHR11384:SF30 - ATP-BINDING CASSETTE, SUB-FAMILY D MEMBER Description:  peroxisomal ABC transporter
Genomic Order:  4606 Name:  ? Medtr3g087350
Secondary Identifier:  ? PAC:31055408
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g087350 0.5kb upstream 0.5kb upstream 12860 true chr3: 39588798-39601657 Medicago truncatula
Medtr3g087350 0.5kb upstream 0.5kb upstream 500 false chr3: 39601158-39601657 Medicago truncatula
Medtr3g087350 0.5kb downstream 0.5kb downstream 12860 true chr3: 39588298-39601157 Medicago truncatula
Medtr3g087350 0.5kb downstream 0.5kb downstream 500 false chr3: 39588298-39588797 Medicago truncatula
Medtr3g087350 1.0kb upstream 1.0kb upstream 13360 true chr3: 39588798-39602157 Medicago truncatula
Medtr3g087350 1.0kb upstream 1.0kb upstream 1000 false chr3: 39601158-39602157 Medicago truncatula
Medtr3g087350 1.0kb downstream 1.0kb downstream 13360 true chr3: 39587798-39601157 Medicago truncatula
Medtr3g087350 1.0kb downstream 1.0kb downstream 1000 false chr3: 39587798-39588797 Medicago truncatula
Medtr3g087350 2.0kb upstream 2.0kb upstream 14360 true chr3: 39588798-39603157 Medicago truncatula
Medtr3g087350 2.0kb upstream 2.0kb upstream 2000 false chr3: 39601158-39603157 Medicago truncatula
Medtr3g087350 2.0kb downstream 2.0kb downstream 14360 true chr3: 39586798-39601157 Medicago truncatula
Medtr3g087350 2.0kb downstream 2.0kb downstream 2000 false chr3: 39586798-39588797 Medicago truncatula
Medtr3g087350 5.0kb upstream 5.0kb upstream 17360 true chr3: 39588798-39606157 Medicago truncatula
Medtr3g087350 5.0kb upstream 5.0kb upstream 5000 false chr3: 39601158-39606157 Medicago truncatula
Medtr3g087350 5.0kb downstream 5.0kb downstream 17360 true chr3: 39583798-39601157 Medicago truncatula
Medtr3g087350 5.0kb downstream 5.0kb downstream 5000 false chr3: 39583798-39588797 Medicago truncatula
Medtr3g087350 10.0kb upstream 10.0kb upstream 22360 true chr3: 39588798-39611157 Medicago truncatula
Medtr3g087350 10.0kb upstream 10.0kb upstream 10000 false chr3: 39601158-39611157 Medicago truncatula
Medtr3g087350 10.0kb downstream 10.0kb downstream 22360 true chr3: 39578798-39601157 Medicago truncatula
Medtr3g087350 10.0kb downstream 10.0kb downstream 10000 false chr3: 39578798-39588797 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310403 5265 Fabidae View MSA
124050169 5270 Rosid View MSA
123738081 5271 Pentapetalae View MSA
122785756 5272 Eudicot View MSA
122046456 5273 Angiosperm View MSA
121348971 5274 Embryophyte View MSA
123424415 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.185        
cufflinks 7.665        
cufflinks 7.309        
cufflinks 1.614       Low
cufflinks 6.394        
cufflinks 1.962       Low
cufflinks 4.826        
cufflinks 7.59        
cufflinks 4.049        

0 Strain