Gene : Medtr3g088590 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11014:SF62 - IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 Description:  IAA-amino acid hydrolase ILR1-like protein
Genomic Order:  4667 Name:  ? Medtr3g088590
Secondary Identifier:  ? PAC:31054807
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088590 0.5kb upstream 0.5kb upstream 8831 true chr3: 40052951-40061781 Medicago truncatula
Medtr3g088590 0.5kb upstream 0.5kb upstream 500 false chr3: 40061282-40061781 Medicago truncatula
Medtr3g088590 0.5kb downstream 0.5kb downstream 8831 true chr3: 40052451-40061281 Medicago truncatula
Medtr3g088590 0.5kb downstream 0.5kb downstream 500 false chr3: 40052451-40052950 Medicago truncatula
Medtr3g088590 1.0kb upstream 1.0kb upstream 9331 true chr3: 40052951-40062281 Medicago truncatula
Medtr3g088590 1.0kb upstream 1.0kb upstream 1000 false chr3: 40061282-40062281 Medicago truncatula
Medtr3g088590 1.0kb downstream 1.0kb downstream 9331 true chr3: 40051951-40061281 Medicago truncatula
Medtr3g088590 1.0kb downstream 1.0kb downstream 1000 false chr3: 40051951-40052950 Medicago truncatula
Medtr3g088590 2.0kb upstream 2.0kb upstream 10331 true chr3: 40052951-40063281 Medicago truncatula
Medtr3g088590 2.0kb upstream 2.0kb upstream 2000 false chr3: 40061282-40063281 Medicago truncatula
Medtr3g088590 2.0kb downstream 2.0kb downstream 10331 true chr3: 40050951-40061281 Medicago truncatula
Medtr3g088590 2.0kb downstream 2.0kb downstream 2000 false chr3: 40050951-40052950 Medicago truncatula
Medtr3g088590 5.0kb upstream 5.0kb upstream 13331 true chr3: 40052951-40066281 Medicago truncatula
Medtr3g088590 5.0kb upstream 5.0kb upstream 5000 false chr3: 40061282-40066281 Medicago truncatula
Medtr3g088590 5.0kb downstream 5.0kb downstream 13331 true chr3: 40047951-40061281 Medicago truncatula
Medtr3g088590 5.0kb downstream 5.0kb downstream 5000 false chr3: 40047951-40052950 Medicago truncatula
Medtr3g088590 10.0kb upstream 10.0kb upstream 18331 true chr3: 40052951-40071281 Medicago truncatula
Medtr3g088590 10.0kb upstream 10.0kb upstream 10000 false chr3: 40061282-40071281 Medicago truncatula
Medtr3g088590 10.0kb downstream 10.0kb downstream 18331 true chr3: 40042951-40061281 Medicago truncatula
Medtr3g088590 10.0kb downstream 10.0kb downstream 10000 false chr3: 40042951-40052950 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305115 5265 Fabidae View MSA
124061387 5270 Rosid View MSA
123745487 5271 Pentapetalae View MSA
122795050 5272 Eudicot View MSA
122047186 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.428       Low
cufflinks 9.059        
cufflinks 4.388        
cufflinks 14.552     High High
cufflinks 5.113        
cufflinks 4.012        
cufflinks 7.416        
cufflinks 7.275        
cufflinks 20.732     High High

0 Strain