Gene : Medtr3g118160 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11669//PTHR11669:SF13 - REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT Description:  replication factor C subunit, putative
Genomic Order:  6726 Name:  ? Medtr3g118160
Secondary Identifier:  ? PAC:31054842
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118160 0.5kb upstream 0.5kb upstream 7804 true chr3: 55299489-55307292 Medicago truncatula
Medtr3g118160 0.5kb upstream 0.5kb upstream 500 false chr3: 55299489-55299988 Medicago truncatula
Medtr3g118160 0.5kb downstream 0.5kb downstream 7804 true chr3: 55299989-55307792 Medicago truncatula
Medtr3g118160 0.5kb downstream 0.5kb downstream 500 false chr3: 55307293-55307792 Medicago truncatula
Medtr3g118160 1.0kb upstream 1.0kb upstream 8304 true chr3: 55298989-55307292 Medicago truncatula
Medtr3g118160 1.0kb upstream 1.0kb upstream 1000 false chr3: 55298989-55299988 Medicago truncatula
Medtr3g118160 1.0kb downstream 1.0kb downstream 8304 true chr3: 55299989-55308292 Medicago truncatula
Medtr3g118160 1.0kb downstream 1.0kb downstream 1000 false chr3: 55307293-55308292 Medicago truncatula
Medtr3g118160 2.0kb upstream 2.0kb upstream 9304 true chr3: 55297989-55307292 Medicago truncatula
Medtr3g118160 2.0kb upstream 2.0kb upstream 2000 false chr3: 55297989-55299988 Medicago truncatula
Medtr3g118160 2.0kb downstream 2.0kb downstream 9304 true chr3: 55299989-55309292 Medicago truncatula
Medtr3g118160 2.0kb downstream 2.0kb downstream 2000 false chr3: 55307293-55309292 Medicago truncatula
Medtr3g118160 5.0kb upstream 5.0kb upstream 12304 true chr3: 55294989-55307292 Medicago truncatula
Medtr3g118160 5.0kb upstream 5.0kb upstream 5000 false chr3: 55294989-55299988 Medicago truncatula
Medtr3g118160 5.0kb downstream 5.0kb downstream 12304 true chr3: 55299989-55312292 Medicago truncatula
Medtr3g118160 5.0kb downstream 5.0kb downstream 5000 false chr3: 55307293-55312292 Medicago truncatula
Medtr3g118160 10.0kb upstream 10.0kb upstream 17304 true chr3: 55289989-55307292 Medicago truncatula
Medtr3g118160 10.0kb upstream 10.0kb upstream 10000 false chr3: 55289989-55299988 Medicago truncatula
Medtr3g118160 10.0kb downstream 10.0kb downstream 17304 true chr3: 55299989-55317292 Medicago truncatula
Medtr3g118160 10.0kb downstream 10.0kb downstream 10000 false chr3: 55307293-55317292 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026695 5273 Angiosperm View MSA
122310171 5265 Fabidae View MSA
124070823 5270 Rosid View MSA
123742601 5271 Pentapetalae View MSA
122795812 5272 Eudicot View MSA
121296483 5274 Embryophyte View MSA
123334635 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.145       High
cufflinks 0.052     Low  
cufflinks 0.083        
cufflinks 0.017     Low Low
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.051     Low  
cufflinks 0.056     Low  

0 Strain