Gene : Medtr3g435170 M. truncatula Mt4.0v1
Defline:  (1 of 5) KOG3292 - Predicted membrane protein Description:  YGL010w-like protein
Genomic Order:  1349 Name:  ? Medtr3g435170
Secondary Identifier:  ? PAC:31060796
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g435170 0.5kb upstream 0.5kb upstream 4361 true chr3: 11469387-11473747 Medicago truncatula
Medtr3g435170 0.5kb upstream 0.5kb upstream 500 false chr3: 11473248-11473747 Medicago truncatula
Medtr3g435170 0.5kb downstream 0.5kb downstream 4361 true chr3: 11468887-11473247 Medicago truncatula
Medtr3g435170 0.5kb downstream 0.5kb downstream 500 false chr3: 11468887-11469386 Medicago truncatula
Medtr3g435170 1.0kb upstream 1.0kb upstream 4861 true chr3: 11469387-11474247 Medicago truncatula
Medtr3g435170 1.0kb upstream 1.0kb upstream 1000 false chr3: 11473248-11474247 Medicago truncatula
Medtr3g435170 1.0kb downstream 1.0kb downstream 4861 true chr3: 11468387-11473247 Medicago truncatula
Medtr3g435170 1.0kb downstream 1.0kb downstream 1000 false chr3: 11468387-11469386 Medicago truncatula
Medtr3g435170 2.0kb upstream 2.0kb upstream 5861 true chr3: 11469387-11475247 Medicago truncatula
Medtr3g435170 2.0kb upstream 2.0kb upstream 2000 false chr3: 11473248-11475247 Medicago truncatula
Medtr3g435170 2.0kb downstream 2.0kb downstream 5861 true chr3: 11467387-11473247 Medicago truncatula
Medtr3g435170 2.0kb downstream 2.0kb downstream 2000 false chr3: 11467387-11469386 Medicago truncatula
Medtr3g435170 5.0kb upstream 5.0kb upstream 8861 true chr3: 11469387-11478247 Medicago truncatula
Medtr3g435170 5.0kb upstream 5.0kb upstream 5000 false chr3: 11473248-11478247 Medicago truncatula
Medtr3g435170 5.0kb downstream 5.0kb downstream 8861 true chr3: 11464387-11473247 Medicago truncatula
Medtr3g435170 5.0kb downstream 5.0kb downstream 5000 false chr3: 11464387-11469386 Medicago truncatula
Medtr3g435170 10.0kb upstream 10.0kb upstream 13861 true chr3: 11469387-11483247 Medicago truncatula
Medtr3g435170 10.0kb upstream 10.0kb upstream 10000 false chr3: 11473248-11483247 Medicago truncatula
Medtr3g435170 10.0kb downstream 10.0kb downstream 13861 true chr3: 11459387-11473247 Medicago truncatula
Medtr3g435170 10.0kb downstream 10.0kb downstream 10000 false chr3: 11459387-11469386 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026462 5273 Angiosperm View MSA
122309033 5265 Fabidae View MSA
124067528 5270 Rosid View MSA
123743297 5271 Pentapetalae View MSA
122787099 5272 Eudicot View MSA
121347335 5274 Embryophyte View MSA
123428191 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.645     High High
cufflinks 5.97        
cufflinks 5.643        
cufflinks 17.379     High  
cufflinks 5.394       Low
cufflinks 15.261     High  
cufflinks 34.437     High High
cufflinks 4.714       Low
cufflinks 18.73     High  

0 Strain