Gene : Medtr3g118535 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR10625//PTHR10625:SF127 - HISTONE DEACETYLASE Description:  histone deacetylase family protein
Genomic Order:  6755 Name:  ? Medtr3g118535
Secondary Identifier:  ? PAC:31055423
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118535 0.5kb upstream 0.5kb upstream 14720 true chr3: 55482675-55497394 Medicago truncatula
Medtr3g118535 0.5kb upstream 0.5kb upstream 500 false chr3: 55482675-55483174 Medicago truncatula
Medtr3g118535 0.5kb downstream 0.5kb downstream 14720 true chr3: 55483175-55497894 Medicago truncatula
Medtr3g118535 0.5kb downstream 0.5kb downstream 500 false chr3: 55497395-55497894 Medicago truncatula
Medtr3g118535 1.0kb upstream 1.0kb upstream 15220 true chr3: 55482175-55497394 Medicago truncatula
Medtr3g118535 1.0kb upstream 1.0kb upstream 1000 false chr3: 55482175-55483174 Medicago truncatula
Medtr3g118535 1.0kb downstream 1.0kb downstream 15220 true chr3: 55483175-55498394 Medicago truncatula
Medtr3g118535 1.0kb downstream 1.0kb downstream 1000 false chr3: 55497395-55498394 Medicago truncatula
Medtr3g118535 2.0kb upstream 2.0kb upstream 16220 true chr3: 55481175-55497394 Medicago truncatula
Medtr3g118535 2.0kb upstream 2.0kb upstream 2000 false chr3: 55481175-55483174 Medicago truncatula
Medtr3g118535 2.0kb downstream 2.0kb downstream 16220 true chr3: 55483175-55499394 Medicago truncatula
Medtr3g118535 2.0kb downstream 2.0kb downstream 2000 false chr3: 55497395-55499394 Medicago truncatula
Medtr3g118535 5.0kb upstream 5.0kb upstream 19220 true chr3: 55478175-55497394 Medicago truncatula
Medtr3g118535 5.0kb upstream 5.0kb upstream 5000 false chr3: 55478175-55483174 Medicago truncatula
Medtr3g118535 5.0kb downstream 5.0kb downstream 19220 true chr3: 55483175-55502394 Medicago truncatula
Medtr3g118535 5.0kb downstream 5.0kb downstream 5000 false chr3: 55497395-55502394 Medicago truncatula
Medtr3g118535 10.0kb upstream 10.0kb upstream 24220 true chr3: 55473175-55497394 Medicago truncatula
Medtr3g118535 10.0kb upstream 10.0kb upstream 10000 false chr3: 55473175-55483174 Medicago truncatula
Medtr3g118535 10.0kb downstream 10.0kb downstream 24220 true chr3: 55483175-55507394 Medicago truncatula
Medtr3g118535 10.0kb downstream 10.0kb downstream 10000 false chr3: 55497395-55507394 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304084 5265 Fabidae View MSA
124064781 5270 Rosid View MSA
123742951 5271 Pentapetalae View MSA
122788730 5272 Eudicot View MSA
122042529 5273 Angiosperm View MSA
123429001 5275 Viridiplantae View MSA
121349926 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.911        
cufflinks 1.444        
cufflinks 1.492        
cufflinks 0.98        
cufflinks 1.666        
cufflinks 0.541       Low
cufflinks 1.604        
cufflinks 1.269        
cufflinks 1.849        

0 Strain