Gene : Medtr3g437680 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11673 - TRANSLATION INITIATION FACTOR 5A-RELATED Description:  eukaryotic translation initiation factor 5A4
Genomic Order:  1458 Name:  ? Medtr3g437680
Secondary Identifier:  ? PAC:31061378
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g437680 0.5kb upstream 0.5kb upstream 10268 true chr3: 12821400-12831667 Medicago truncatula
Medtr3g437680 0.5kb upstream 0.5kb upstream 500 false chr3: 12821400-12821899 Medicago truncatula
Medtr3g437680 0.5kb downstream 0.5kb downstream 10268 true chr3: 12821900-12832167 Medicago truncatula
Medtr3g437680 0.5kb downstream 0.5kb downstream 500 false chr3: 12831668-12832167 Medicago truncatula
Medtr3g437680 1.0kb upstream 1.0kb upstream 10768 true chr3: 12820900-12831667 Medicago truncatula
Medtr3g437680 1.0kb upstream 1.0kb upstream 1000 false chr3: 12820900-12821899 Medicago truncatula
Medtr3g437680 1.0kb downstream 1.0kb downstream 10768 true chr3: 12821900-12832667 Medicago truncatula
Medtr3g437680 1.0kb downstream 1.0kb downstream 1000 false chr3: 12831668-12832667 Medicago truncatula
Medtr3g437680 2.0kb upstream 2.0kb upstream 11768 true chr3: 12819900-12831667 Medicago truncatula
Medtr3g437680 2.0kb upstream 2.0kb upstream 2000 false chr3: 12819900-12821899 Medicago truncatula
Medtr3g437680 2.0kb downstream 2.0kb downstream 11768 true chr3: 12821900-12833667 Medicago truncatula
Medtr3g437680 2.0kb downstream 2.0kb downstream 2000 false chr3: 12831668-12833667 Medicago truncatula
Medtr3g437680 5.0kb upstream 5.0kb upstream 14768 true chr3: 12816900-12831667 Medicago truncatula
Medtr3g437680 5.0kb upstream 5.0kb upstream 5000 false chr3: 12816900-12821899 Medicago truncatula
Medtr3g437680 5.0kb downstream 5.0kb downstream 14768 true chr3: 12821900-12836667 Medicago truncatula
Medtr3g437680 5.0kb downstream 5.0kb downstream 5000 false chr3: 12831668-12836667 Medicago truncatula
Medtr3g437680 10.0kb upstream 10.0kb upstream 19768 true chr3: 12811900-12831667 Medicago truncatula
Medtr3g437680 10.0kb upstream 10.0kb upstream 10000 false chr3: 12811900-12821899 Medicago truncatula
Medtr3g437680 10.0kb downstream 10.0kb downstream 19768 true chr3: 12821900-12841667 Medicago truncatula
Medtr3g437680 10.0kb downstream 10.0kb downstream 10000 false chr3: 12831668-12841667 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312678 5265 Fabidae View MSA
124072640 5270 Rosid View MSA
123750235 5271 Pentapetalae View MSA
122796875 5272 Eudicot View MSA
122047476 5273 Angiosperm View MSA
121345847 5274 Embryophyte View MSA
123426583 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.328        
cufflinks 2.479        
cufflinks 2.808        
cufflinks 9.525     High High
cufflinks 2.739        
cufflinks 8.403       High
cufflinks 4.493        
cufflinks 2.463        
cufflinks 6.238        

0 Strain