Gene : Medtr3g437990 M. truncatula Mt4.0v1
Defline:  (1 of 3) KOG0059 - Lipid exporter ABCA1 and related proteins, ABC superfamily Description:  ABC transporter A family protein
Genomic Order:  1468 Name:  ? Medtr3g437990
Secondary Identifier:  ? PAC:31054067
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g437990 0.5kb upstream 0.5kb upstream 8770 true chr3: 12977684-12986453 Medicago truncatula
Medtr3g437990 0.5kb upstream 0.5kb upstream 500 false chr3: 12977684-12978183 Medicago truncatula
Medtr3g437990 0.5kb downstream 0.5kb downstream 8770 true chr3: 12978184-12986953 Medicago truncatula
Medtr3g437990 0.5kb downstream 0.5kb downstream 500 false chr3: 12986454-12986953 Medicago truncatula
Medtr3g437990 1.0kb upstream 1.0kb upstream 9270 true chr3: 12977184-12986453 Medicago truncatula
Medtr3g437990 1.0kb upstream 1.0kb upstream 1000 false chr3: 12977184-12978183 Medicago truncatula
Medtr3g437990 1.0kb downstream 1.0kb downstream 9270 true chr3: 12978184-12987453 Medicago truncatula
Medtr3g437990 1.0kb downstream 1.0kb downstream 1000 false chr3: 12986454-12987453 Medicago truncatula
Medtr3g437990 2.0kb upstream 2.0kb upstream 10270 true chr3: 12976184-12986453 Medicago truncatula
Medtr3g437990 2.0kb upstream 2.0kb upstream 2000 false chr3: 12976184-12978183 Medicago truncatula
Medtr3g437990 2.0kb downstream 2.0kb downstream 10270 true chr3: 12978184-12988453 Medicago truncatula
Medtr3g437990 2.0kb downstream 2.0kb downstream 2000 false chr3: 12986454-12988453 Medicago truncatula
Medtr3g437990 5.0kb upstream 5.0kb upstream 13270 true chr3: 12973184-12986453 Medicago truncatula
Medtr3g437990 5.0kb upstream 5.0kb upstream 5000 false chr3: 12973184-12978183 Medicago truncatula
Medtr3g437990 5.0kb downstream 5.0kb downstream 13270 true chr3: 12978184-12991453 Medicago truncatula
Medtr3g437990 5.0kb downstream 5.0kb downstream 5000 false chr3: 12986454-12991453 Medicago truncatula
Medtr3g437990 10.0kb upstream 10.0kb upstream 18270 true chr3: 12968184-12986453 Medicago truncatula
Medtr3g437990 10.0kb upstream 10.0kb upstream 10000 false chr3: 12968184-12978183 Medicago truncatula
Medtr3g437990 10.0kb downstream 10.0kb downstream 18270 true chr3: 12978184-12996453 Medicago truncatula
Medtr3g437990 10.0kb downstream 10.0kb downstream 10000 false chr3: 12986454-12996453 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301698 5265 Fabidae View MSA
124067078 5270 Rosid View MSA
123750252 5271 Pentapetalae View MSA
122786986 5272 Eudicot View MSA
122046360 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121347402 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 56.239     High High
cufflinks 2.318        
cufflinks 2.851        
cufflinks 6.497        
cufflinks 2.786        
cufflinks 13.458     High  
cufflinks 38.259     High High
cufflinks 1.84       Low
cufflinks 13.984     High  

0 Strain