Gene : Medtr3g462340 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11468:SF4 - ALPHA-GLUCAN PHOSPHORYLASE 2, CYTOSOLIC Description:  glycogen/starch/alpha-glucan phosphorylase family protein
Genomic Order:  2605 Name:  ? Medtr3g462340
Secondary Identifier:  ? PAC:31060672
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5941 Medicago truncatula pathologic  
Mtruncatula PWY-7238 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g462340 0.5kb upstream 0.5kb upstream 8109 true chr3: 24880872-24888980 Medicago truncatula
Medtr3g462340 0.5kb upstream 0.5kb upstream 500 false chr3: 24888481-24888980 Medicago truncatula
Medtr3g462340 0.5kb downstream 0.5kb downstream 8109 true chr3: 24880372-24888480 Medicago truncatula
Medtr3g462340 0.5kb downstream 0.5kb downstream 500 false chr3: 24880372-24880871 Medicago truncatula
Medtr3g462340 1.0kb upstream 1.0kb upstream 8609 true chr3: 24880872-24889480 Medicago truncatula
Medtr3g462340 1.0kb upstream 1.0kb upstream 1000 false chr3: 24888481-24889480 Medicago truncatula
Medtr3g462340 1.0kb downstream 1.0kb downstream 8609 true chr3: 24879872-24888480 Medicago truncatula
Medtr3g462340 1.0kb downstream 1.0kb downstream 1000 false chr3: 24879872-24880871 Medicago truncatula
Medtr3g462340 2.0kb upstream 2.0kb upstream 9609 true chr3: 24880872-24890480 Medicago truncatula
Medtr3g462340 2.0kb upstream 2.0kb upstream 2000 false chr3: 24888481-24890480 Medicago truncatula
Medtr3g462340 2.0kb downstream 2.0kb downstream 9609 true chr3: 24878872-24888480 Medicago truncatula
Medtr3g462340 2.0kb downstream 2.0kb downstream 2000 false chr3: 24878872-24880871 Medicago truncatula
Medtr3g462340 5.0kb upstream 5.0kb upstream 12609 true chr3: 24880872-24893480 Medicago truncatula
Medtr3g462340 5.0kb upstream 5.0kb upstream 5000 false chr3: 24888481-24893480 Medicago truncatula
Medtr3g462340 5.0kb downstream 5.0kb downstream 12609 true chr3: 24875872-24888480 Medicago truncatula
Medtr3g462340 5.0kb downstream 5.0kb downstream 5000 false chr3: 24875872-24880871 Medicago truncatula
Medtr3g462340 10.0kb upstream 10.0kb upstream 17609 true chr3: 24880872-24898480 Medicago truncatula
Medtr3g462340 10.0kb upstream 10.0kb upstream 10000 false chr3: 24888481-24898480 Medicago truncatula
Medtr3g462340 10.0kb downstream 10.0kb downstream 17609 true chr3: 24870872-24888480 Medicago truncatula
Medtr3g462340 10.0kb downstream 10.0kb downstream 10000 false chr3: 24870872-24880871 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304647 5265 Fabidae View MSA
124069139 5270 Rosid View MSA
123737453 5271 Pentapetalae View MSA
122789907 5272 Eudicot View MSA
122042301 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.549        
cufflinks 1.04        
cufflinks 2.454        
cufflinks 0.2       Low
cufflinks 9.847       High
cufflinks 0.13     Low Low
cufflinks 0.397        
cufflinks 1.491        
cufflinks 0.462        

0 Strain