Gene : Medtr3g113240 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR14150 - U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14 Description:  U3 small nucleolar RNA-associated-like protein
Genomic Order:  6409 Name:  ? Medtr3g113240
Secondary Identifier:  ? PAC:31061424
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g113240 0.5kb upstream 0.5kb upstream 6185 true chr3: 52924818-52931002 Medicago truncatula
Medtr3g113240 0.5kb upstream 0.5kb upstream 500 false chr3: 52930503-52931002 Medicago truncatula
Medtr3g113240 0.5kb downstream 0.5kb downstream 6185 true chr3: 52924318-52930502 Medicago truncatula
Medtr3g113240 0.5kb downstream 0.5kb downstream 500 false chr3: 52924318-52924817 Medicago truncatula
Medtr3g113240 1.0kb upstream 1.0kb upstream 6685 true chr3: 52924818-52931502 Medicago truncatula
Medtr3g113240 1.0kb upstream 1.0kb upstream 1000 false chr3: 52930503-52931502 Medicago truncatula
Medtr3g113240 1.0kb downstream 1.0kb downstream 6685 true chr3: 52923818-52930502 Medicago truncatula
Medtr3g113240 1.0kb downstream 1.0kb downstream 1000 false chr3: 52923818-52924817 Medicago truncatula
Medtr3g113240 2.0kb upstream 2.0kb upstream 7685 true chr3: 52924818-52932502 Medicago truncatula
Medtr3g113240 2.0kb upstream 2.0kb upstream 2000 false chr3: 52930503-52932502 Medicago truncatula
Medtr3g113240 2.0kb downstream 2.0kb downstream 7685 true chr3: 52922818-52930502 Medicago truncatula
Medtr3g113240 2.0kb downstream 2.0kb downstream 2000 false chr3: 52922818-52924817 Medicago truncatula
Medtr3g113240 5.0kb upstream 5.0kb upstream 10685 true chr3: 52924818-52935502 Medicago truncatula
Medtr3g113240 5.0kb upstream 5.0kb upstream 5000 false chr3: 52930503-52935502 Medicago truncatula
Medtr3g113240 5.0kb downstream 5.0kb downstream 10685 true chr3: 52919818-52930502 Medicago truncatula
Medtr3g113240 5.0kb downstream 5.0kb downstream 5000 false chr3: 52919818-52924817 Medicago truncatula
Medtr3g113240 10.0kb upstream 10.0kb upstream 15685 true chr3: 52924818-52940502 Medicago truncatula
Medtr3g113240 10.0kb upstream 10.0kb upstream 10000 false chr3: 52930503-52940502 Medicago truncatula
Medtr3g113240 10.0kb downstream 10.0kb downstream 15685 true chr3: 52914818-52930502 Medicago truncatula
Medtr3g113240 10.0kb downstream 10.0kb downstream 10000 false chr3: 52914818-52924817 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301492 5265 Fabidae View MSA
124066027 5270 Rosid View MSA
123741569 5271 Pentapetalae View MSA
122789382 5272 Eudicot View MSA
122043501 5273 Angiosperm View MSA
121349819 5274 Embryophyte View MSA
123425174 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.425        
cufflinks 4.964        
cufflinks 5.834        
cufflinks 0.377       Low
cufflinks 6.238        
cufflinks 0.323       Low
cufflinks 1.478        
cufflinks 4.377        
cufflinks 0.637        

0 Strain