Gene : Medtr3g113790 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12300:SF26 - HVA22-LIKE PROTEIN G-RELATED Description:  abscisic acid-responsive (TB2/DP1, HVA22) family protein
Genomic Order:  6424 Name:  ? Medtr3g113790
Secondary Identifier:  ? PAC:31059289
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g113790 0.5kb upstream 0.5kb upstream 4276 true chr3: 53077224-53081499 Medicago truncatula
Medtr3g113790 0.5kb upstream 0.5kb upstream 500 false chr3: 53077224-53077723 Medicago truncatula
Medtr3g113790 0.5kb downstream 0.5kb downstream 4276 true chr3: 53077724-53081999 Medicago truncatula
Medtr3g113790 0.5kb downstream 0.5kb downstream 500 false chr3: 53081500-53081999 Medicago truncatula
Medtr3g113790 1.0kb upstream 1.0kb upstream 4776 true chr3: 53076724-53081499 Medicago truncatula
Medtr3g113790 1.0kb upstream 1.0kb upstream 1000 false chr3: 53076724-53077723 Medicago truncatula
Medtr3g113790 1.0kb downstream 1.0kb downstream 4776 true chr3: 53077724-53082499 Medicago truncatula
Medtr3g113790 1.0kb downstream 1.0kb downstream 1000 false chr3: 53081500-53082499 Medicago truncatula
Medtr3g113790 2.0kb upstream 2.0kb upstream 5776 true chr3: 53075724-53081499 Medicago truncatula
Medtr3g113790 2.0kb upstream 2.0kb upstream 2000 false chr3: 53075724-53077723 Medicago truncatula
Medtr3g113790 2.0kb downstream 2.0kb downstream 5776 true chr3: 53077724-53083499 Medicago truncatula
Medtr3g113790 2.0kb downstream 2.0kb downstream 2000 false chr3: 53081500-53083499 Medicago truncatula
Medtr3g113790 5.0kb upstream 5.0kb upstream 8776 true chr3: 53072724-53081499 Medicago truncatula
Medtr3g113790 5.0kb upstream 5.0kb upstream 5000 false chr3: 53072724-53077723 Medicago truncatula
Medtr3g113790 5.0kb downstream 5.0kb downstream 8776 true chr3: 53077724-53086499 Medicago truncatula
Medtr3g113790 5.0kb downstream 5.0kb downstream 5000 false chr3: 53081500-53086499 Medicago truncatula
Medtr3g113790 10.0kb upstream 10.0kb upstream 13776 true chr3: 53067724-53081499 Medicago truncatula
Medtr3g113790 10.0kb upstream 10.0kb upstream 10000 false chr3: 53067724-53077723 Medicago truncatula
Medtr3g113790 10.0kb downstream 10.0kb downstream 13776 true chr3: 53077724-53091499 Medicago truncatula
Medtr3g113790 10.0kb downstream 10.0kb downstream 10000 false chr3: 53081500-53091499 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289375 5265 Fabidae View MSA
124068207 5270 Rosid View MSA
123753523 5271 Pentapetalae View MSA
122794920 5272 Eudicot View MSA
122050664 5273 Angiosperm View MSA
121348530 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.795        
cufflinks 1.076        
cufflinks 1.419       High
cufflinks 1.427       High
cufflinks 1.32        
cufflinks 0.991        
cufflinks 0.641       Low
cufflinks 0.96        
cufflinks 0.793        

0 Strain