Gene : Medtr3g114840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR18896//PTHR18896:SF72 - PHOSPHOLIPASE D Description:  phospholipase D alpha 1
Genomic Order:  6500 Name:  ? Medtr3g114840
Secondary Identifier:  ? PAC:31058831
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPASYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3561 Medicago truncatula pathologic  
Mtruncatula PWY-7039 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g114840 0.5kb upstream 0.5kb upstream 9591 true chr3: 53616031-53625621 Medicago truncatula
Medtr3g114840 0.5kb upstream 0.5kb upstream 500 false chr3: 53616031-53616530 Medicago truncatula
Medtr3g114840 0.5kb downstream 0.5kb downstream 9591 true chr3: 53616531-53626121 Medicago truncatula
Medtr3g114840 0.5kb downstream 0.5kb downstream 500 false chr3: 53625622-53626121 Medicago truncatula
Medtr3g114840 1.0kb upstream 1.0kb upstream 10091 true chr3: 53615531-53625621 Medicago truncatula
Medtr3g114840 1.0kb upstream 1.0kb upstream 1000 false chr3: 53615531-53616530 Medicago truncatula
Medtr3g114840 1.0kb downstream 1.0kb downstream 10091 true chr3: 53616531-53626621 Medicago truncatula
Medtr3g114840 1.0kb downstream 1.0kb downstream 1000 false chr3: 53625622-53626621 Medicago truncatula
Medtr3g114840 2.0kb upstream 2.0kb upstream 11091 true chr3: 53614531-53625621 Medicago truncatula
Medtr3g114840 2.0kb upstream 2.0kb upstream 2000 false chr3: 53614531-53616530 Medicago truncatula
Medtr3g114840 2.0kb downstream 2.0kb downstream 11091 true chr3: 53616531-53627621 Medicago truncatula
Medtr3g114840 2.0kb downstream 2.0kb downstream 2000 false chr3: 53625622-53627621 Medicago truncatula
Medtr3g114840 5.0kb upstream 5.0kb upstream 14091 true chr3: 53611531-53625621 Medicago truncatula
Medtr3g114840 5.0kb upstream 5.0kb upstream 5000 false chr3: 53611531-53616530 Medicago truncatula
Medtr3g114840 5.0kb downstream 5.0kb downstream 14091 true chr3: 53616531-53630621 Medicago truncatula
Medtr3g114840 5.0kb downstream 5.0kb downstream 5000 false chr3: 53625622-53630621 Medicago truncatula
Medtr3g114840 10.0kb upstream 10.0kb upstream 19091 true chr3: 53606531-53625621 Medicago truncatula
Medtr3g114840 10.0kb upstream 10.0kb upstream 10000 false chr3: 53606531-53616530 Medicago truncatula
Medtr3g114840 10.0kb downstream 10.0kb downstream 19091 true chr3: 53616531-53635621 Medicago truncatula
Medtr3g114840 10.0kb downstream 10.0kb downstream 10000 false chr3: 53625622-53635621 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302334 5265 Fabidae View MSA
124069649 5270 Rosid View MSA
123749606 5271 Pentapetalae View MSA
122795845 5272 Eudicot View MSA
122049262 5273 Angiosperm View MSA
121347041 5274 Embryophyte View MSA
123380485 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.155        
cufflinks 4.771       High
cufflinks 2.742        
cufflinks 0.103        
cufflinks 1.896        
cufflinks 0.007     Low Low
cufflinks 0.216        
cufflinks 3.964       High
cufflinks 0.251        

0 Strain