Gene : Medtr3g115110 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23076:SF33 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 1, CHLOROPLASTIC-RELATED Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  6521 Name:  ? Medtr3g115110
Secondary Identifier:  ? PAC:31060969
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g115110 0.5kb upstream 0.5kb upstream 5365 true chr3: 53794496-53799860 Medicago truncatula
Medtr3g115110 0.5kb upstream 0.5kb upstream 500 false chr3: 53794496-53794995 Medicago truncatula
Medtr3g115110 0.5kb downstream 0.5kb downstream 5365 true chr3: 53794996-53800360 Medicago truncatula
Medtr3g115110 0.5kb downstream 0.5kb downstream 500 false chr3: 53799861-53800360 Medicago truncatula
Medtr3g115110 1.0kb upstream 1.0kb upstream 5865 true chr3: 53793996-53799860 Medicago truncatula
Medtr3g115110 1.0kb upstream 1.0kb upstream 1000 false chr3: 53793996-53794995 Medicago truncatula
Medtr3g115110 1.0kb downstream 1.0kb downstream 5865 true chr3: 53794996-53800860 Medicago truncatula
Medtr3g115110 1.0kb downstream 1.0kb downstream 1000 false chr3: 53799861-53800860 Medicago truncatula
Medtr3g115110 2.0kb upstream 2.0kb upstream 6865 true chr3: 53792996-53799860 Medicago truncatula
Medtr3g115110 2.0kb upstream 2.0kb upstream 2000 false chr3: 53792996-53794995 Medicago truncatula
Medtr3g115110 2.0kb downstream 2.0kb downstream 6865 true chr3: 53794996-53801860 Medicago truncatula
Medtr3g115110 2.0kb downstream 2.0kb downstream 2000 false chr3: 53799861-53801860 Medicago truncatula
Medtr3g115110 5.0kb upstream 5.0kb upstream 9865 true chr3: 53789996-53799860 Medicago truncatula
Medtr3g115110 5.0kb upstream 5.0kb upstream 5000 false chr3: 53789996-53794995 Medicago truncatula
Medtr3g115110 5.0kb downstream 5.0kb downstream 9865 true chr3: 53794996-53804860 Medicago truncatula
Medtr3g115110 5.0kb downstream 5.0kb downstream 5000 false chr3: 53799861-53804860 Medicago truncatula
Medtr3g115110 10.0kb upstream 10.0kb upstream 14865 true chr3: 53784996-53799860 Medicago truncatula
Medtr3g115110 10.0kb upstream 10.0kb upstream 10000 false chr3: 53784996-53794995 Medicago truncatula
Medtr3g115110 10.0kb downstream 10.0kb downstream 14865 true chr3: 53794996-53809860 Medicago truncatula
Medtr3g115110 10.0kb downstream 10.0kb downstream 10000 false chr3: 53799861-53809860 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310077 5265 Fabidae View MSA
124060614 5270 Rosid View MSA
123737451 5271 Pentapetalae View MSA
122792150 5272 Eudicot View MSA
122046642 5273 Angiosperm View MSA
121346512 5274 Embryophyte View MSA
123425128 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.429       Low
cufflinks 209.321     High High
cufflinks 232.9     High High
cufflinks 14.371     High  
cufflinks 145.879     High  
cufflinks 6.565       Low
cufflinks 10.673     High  
cufflinks 217.435     High High
cufflinks 8.742        

0 Strain