Gene : Medtr3g116100 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31500:SF0 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Description:  DUF296 domain protein
Genomic Order:  6580 Name:  ? Medtr3g116100
Secondary Identifier:  ? PAC:31055922
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116100 0.5kb upstream 0.5kb upstream 4317 true chr3: 54280231-54284547 Medicago truncatula
Medtr3g116100 0.5kb upstream 0.5kb upstream 500 false chr3: 54284048-54284547 Medicago truncatula
Medtr3g116100 0.5kb downstream 0.5kb downstream 4317 true chr3: 54279731-54284047 Medicago truncatula
Medtr3g116100 0.5kb downstream 0.5kb downstream 500 false chr3: 54279731-54280230 Medicago truncatula
Medtr3g116100 1.0kb upstream 1.0kb upstream 4817 true chr3: 54280231-54285047 Medicago truncatula
Medtr3g116100 1.0kb upstream 1.0kb upstream 1000 false chr3: 54284048-54285047 Medicago truncatula
Medtr3g116100 1.0kb downstream 1.0kb downstream 4817 true chr3: 54279231-54284047 Medicago truncatula
Medtr3g116100 1.0kb downstream 1.0kb downstream 1000 false chr3: 54279231-54280230 Medicago truncatula
Medtr3g116100 2.0kb upstream 2.0kb upstream 5817 true chr3: 54280231-54286047 Medicago truncatula
Medtr3g116100 2.0kb upstream 2.0kb upstream 2000 false chr3: 54284048-54286047 Medicago truncatula
Medtr3g116100 2.0kb downstream 2.0kb downstream 5817 true chr3: 54278231-54284047 Medicago truncatula
Medtr3g116100 2.0kb downstream 2.0kb downstream 2000 false chr3: 54278231-54280230 Medicago truncatula
Medtr3g116100 5.0kb upstream 5.0kb upstream 8817 true chr3: 54280231-54289047 Medicago truncatula
Medtr3g116100 5.0kb upstream 5.0kb upstream 5000 false chr3: 54284048-54289047 Medicago truncatula
Medtr3g116100 5.0kb downstream 5.0kb downstream 8817 true chr3: 54275231-54284047 Medicago truncatula
Medtr3g116100 5.0kb downstream 5.0kb downstream 5000 false chr3: 54275231-54280230 Medicago truncatula
Medtr3g116100 10.0kb upstream 10.0kb upstream 13817 true chr3: 54280231-54294047 Medicago truncatula
Medtr3g116100 10.0kb upstream 10.0kb upstream 10000 false chr3: 54284048-54294047 Medicago truncatula
Medtr3g116100 10.0kb downstream 10.0kb downstream 13817 true chr3: 54270231-54284047 Medicago truncatula
Medtr3g116100 10.0kb downstream 10.0kb downstream 10000 false chr3: 54270231-54280230 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304333 5265 Fabidae View MSA
124069070 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain