Gene : Medtr3g117270 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12505:SF25 - FINGER AND BAH MOTIF CONTAINING PUTATIVE TRANSCRIPTION FACTOR-RELATED Description:  PHD finger and bromo-adjacent-like domain protein
Genomic Order:  6663 Name:  ? Medtr3g117270
Secondary Identifier:  ? PAC:31056253
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117270 0.5kb upstream 0.5kb upstream 4911 true chr3: 54852829-54857739 Medicago truncatula
Medtr3g117270 0.5kb upstream 0.5kb upstream 500 false chr3: 54852829-54853328 Medicago truncatula
Medtr3g117270 0.5kb downstream 0.5kb downstream 4911 true chr3: 54853329-54858239 Medicago truncatula
Medtr3g117270 0.5kb downstream 0.5kb downstream 500 false chr3: 54857740-54858239 Medicago truncatula
Medtr3g117270 1.0kb upstream 1.0kb upstream 5411 true chr3: 54852329-54857739 Medicago truncatula
Medtr3g117270 1.0kb upstream 1.0kb upstream 1000 false chr3: 54852329-54853328 Medicago truncatula
Medtr3g117270 1.0kb downstream 1.0kb downstream 5411 true chr3: 54853329-54858739 Medicago truncatula
Medtr3g117270 1.0kb downstream 1.0kb downstream 1000 false chr3: 54857740-54858739 Medicago truncatula
Medtr3g117270 2.0kb upstream 2.0kb upstream 6411 true chr3: 54851329-54857739 Medicago truncatula
Medtr3g117270 2.0kb upstream 2.0kb upstream 2000 false chr3: 54851329-54853328 Medicago truncatula
Medtr3g117270 2.0kb downstream 2.0kb downstream 6411 true chr3: 54853329-54859739 Medicago truncatula
Medtr3g117270 2.0kb downstream 2.0kb downstream 2000 false chr3: 54857740-54859739 Medicago truncatula
Medtr3g117270 5.0kb upstream 5.0kb upstream 9411 true chr3: 54848329-54857739 Medicago truncatula
Medtr3g117270 5.0kb upstream 5.0kb upstream 5000 false chr3: 54848329-54853328 Medicago truncatula
Medtr3g117270 5.0kb downstream 5.0kb downstream 9411 true chr3: 54853329-54862739 Medicago truncatula
Medtr3g117270 5.0kb downstream 5.0kb downstream 5000 false chr3: 54857740-54862739 Medicago truncatula
Medtr3g117270 10.0kb upstream 10.0kb upstream 14411 true chr3: 54843329-54857739 Medicago truncatula
Medtr3g117270 10.0kb upstream 10.0kb upstream 10000 false chr3: 54843329-54853328 Medicago truncatula
Medtr3g117270 10.0kb downstream 10.0kb downstream 14411 true chr3: 54853329-54867739 Medicago truncatula
Medtr3g117270 10.0kb downstream 10.0kb downstream 10000 false chr3: 54857740-54867739 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026727 5273 Angiosperm View MSA
122308198 5265 Fabidae View MSA
124069768 5270 Rosid View MSA
123749923 5271 Pentapetalae View MSA
122773372 5272 Eudicot View MSA
121296509 5274 Embryophyte View MSA
123426883 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.989       High
cufflinks 2.523        
cufflinks 2.711        
cufflinks 3.261       High
cufflinks 2.644        
cufflinks 2.742        
cufflinks 2.497       Low
cufflinks 2.574        
cufflinks 2.649        

0 Strain