Gene : Medtr3g117800 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31490:SF3 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Description:  glycosyl hydrolase family 10 protein
Genomic Order:  6703 Name:  ? Medtr3g117800
Secondary Identifier:  ? PAC:31058874
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117800 0.5kb upstream 0.5kb upstream 3077 true chr3: 55160645-55163721 Medicago truncatula
Medtr3g117800 0.5kb upstream 0.5kb upstream 500 false chr3: 55160645-55161144 Medicago truncatula
Medtr3g117800 0.5kb downstream 0.5kb downstream 3077 true chr3: 55161145-55164221 Medicago truncatula
Medtr3g117800 0.5kb downstream 0.5kb downstream 500 false chr3: 55163722-55164221 Medicago truncatula
Medtr3g117800 1.0kb upstream 1.0kb upstream 3577 true chr3: 55160145-55163721 Medicago truncatula
Medtr3g117800 1.0kb upstream 1.0kb upstream 1000 false chr3: 55160145-55161144 Medicago truncatula
Medtr3g117800 1.0kb downstream 1.0kb downstream 3577 true chr3: 55161145-55164721 Medicago truncatula
Medtr3g117800 1.0kb downstream 1.0kb downstream 1000 false chr3: 55163722-55164721 Medicago truncatula
Medtr3g117800 2.0kb upstream 2.0kb upstream 4577 true chr3: 55159145-55163721 Medicago truncatula
Medtr3g117800 2.0kb upstream 2.0kb upstream 2000 false chr3: 55159145-55161144 Medicago truncatula
Medtr3g117800 2.0kb downstream 2.0kb downstream 4577 true chr3: 55161145-55165721 Medicago truncatula
Medtr3g117800 2.0kb downstream 2.0kb downstream 2000 false chr3: 55163722-55165721 Medicago truncatula
Medtr3g117800 5.0kb upstream 5.0kb upstream 7577 true chr3: 55156145-55163721 Medicago truncatula
Medtr3g117800 5.0kb upstream 5.0kb upstream 5000 false chr3: 55156145-55161144 Medicago truncatula
Medtr3g117800 5.0kb downstream 5.0kb downstream 7577 true chr3: 55161145-55168721 Medicago truncatula
Medtr3g117800 5.0kb downstream 5.0kb downstream 5000 false chr3: 55163722-55168721 Medicago truncatula
Medtr3g117800 10.0kb upstream 10.0kb upstream 12577 true chr3: 55151145-55163721 Medicago truncatula
Medtr3g117800 10.0kb upstream 10.0kb upstream 10000 false chr3: 55151145-55161144 Medicago truncatula
Medtr3g117800 10.0kb downstream 10.0kb downstream 12577 true chr3: 55161145-55173721 Medicago truncatula
Medtr3g117800 10.0kb downstream 10.0kb downstream 10000 false chr3: 55163722-55173721 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306431 5265 Fabidae View MSA
124067450 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.084        
cufflinks 0.629        
cufflinks 1.046        
cufflinks 0.002     Low Low
cufflinks 0.937        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.738        
cufflinks 0.015     Low  

0 Strain