Gene : Medtr3g117840 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF02140//PF02449//PF13364 - Galactose binding lectin domain (Gal_Lectin) // Beta-galactosidase (Glyco_hydro_42) // Beta-galactosidase jelly roll domain (BetaGal_dom4_5) Description:  glycoside hydrolase family 35 protein
Genomic Order:  6706 Name:  ? Medtr3g117840
Secondary Identifier:  ? PAC:31056355
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117840 0.5kb upstream 0.5kb upstream 3982 true chr3: 55170982-55174963 Medicago truncatula
Medtr3g117840 0.5kb upstream 0.5kb upstream 500 false chr3: 55174464-55174963 Medicago truncatula
Medtr3g117840 0.5kb downstream 0.5kb downstream 3982 true chr3: 55170482-55174463 Medicago truncatula
Medtr3g117840 0.5kb downstream 0.5kb downstream 500 false chr3: 55170482-55170981 Medicago truncatula
Medtr3g117840 1.0kb upstream 1.0kb upstream 4482 true chr3: 55170982-55175463 Medicago truncatula
Medtr3g117840 1.0kb upstream 1.0kb upstream 1000 false chr3: 55174464-55175463 Medicago truncatula
Medtr3g117840 1.0kb downstream 1.0kb downstream 4482 true chr3: 55169982-55174463 Medicago truncatula
Medtr3g117840 1.0kb downstream 1.0kb downstream 1000 false chr3: 55169982-55170981 Medicago truncatula
Medtr3g117840 2.0kb upstream 2.0kb upstream 5482 true chr3: 55170982-55176463 Medicago truncatula
Medtr3g117840 2.0kb upstream 2.0kb upstream 2000 false chr3: 55174464-55176463 Medicago truncatula
Medtr3g117840 2.0kb downstream 2.0kb downstream 5482 true chr3: 55168982-55174463 Medicago truncatula
Medtr3g117840 2.0kb downstream 2.0kb downstream 2000 false chr3: 55168982-55170981 Medicago truncatula
Medtr3g117840 5.0kb upstream 5.0kb upstream 8482 true chr3: 55170982-55179463 Medicago truncatula
Medtr3g117840 5.0kb upstream 5.0kb upstream 5000 false chr3: 55174464-55179463 Medicago truncatula
Medtr3g117840 5.0kb downstream 5.0kb downstream 8482 true chr3: 55165982-55174463 Medicago truncatula
Medtr3g117840 5.0kb downstream 5.0kb downstream 5000 false chr3: 55165982-55170981 Medicago truncatula
Medtr3g117840 10.0kb upstream 10.0kb upstream 13482 true chr3: 55170982-55184463 Medicago truncatula
Medtr3g117840 10.0kb upstream 10.0kb upstream 10000 false chr3: 55174464-55184463 Medicago truncatula
Medtr3g117840 10.0kb downstream 10.0kb downstream 13482 true chr3: 55160982-55174463 Medicago truncatula
Medtr3g117840 10.0kb downstream 10.0kb downstream 10000 false chr3: 55160982-55170981 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310069 5265 Fabidae View MSA
124073107 5270 Rosid View MSA
123750727 5271 Pentapetalae View MSA
122791084 5272 Eudicot View MSA
122042357 5273 Angiosperm View MSA
121309952 5274 Embryophyte View MSA
123347574 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.651        
cufflinks 0.931        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.736        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low Low
cufflinks 0.7        
cufflinks 0.03     Low  

0 Strain