Gene : Medtr3g110200 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF87 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED Description:  glycosyltransferase plant-like protein
Genomic Order:  6193 Name:  ? Medtr3g110200
Secondary Identifier:  ? PAC:31059967
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5980 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g110200 0.5kb upstream 0.5kb upstream 3474 true chr3: 51208734-51212207 Medicago truncatula
Medtr3g110200 0.5kb upstream 0.5kb upstream 500 false chr3: 51208734-51209233 Medicago truncatula
Medtr3g110200 0.5kb downstream 0.5kb downstream 3474 true chr3: 51209234-51212707 Medicago truncatula
Medtr3g110200 0.5kb downstream 0.5kb downstream 500 false chr3: 51212208-51212707 Medicago truncatula
Medtr3g110200 1.0kb upstream 1.0kb upstream 3974 true chr3: 51208234-51212207 Medicago truncatula
Medtr3g110200 1.0kb upstream 1.0kb upstream 1000 false chr3: 51208234-51209233 Medicago truncatula
Medtr3g110200 1.0kb downstream 1.0kb downstream 3974 true chr3: 51209234-51213207 Medicago truncatula
Medtr3g110200 1.0kb downstream 1.0kb downstream 1000 false chr3: 51212208-51213207 Medicago truncatula
Medtr3g110200 2.0kb upstream 2.0kb upstream 4974 true chr3: 51207234-51212207 Medicago truncatula
Medtr3g110200 2.0kb upstream 2.0kb upstream 2000 false chr3: 51207234-51209233 Medicago truncatula
Medtr3g110200 2.0kb downstream 2.0kb downstream 4974 true chr3: 51209234-51214207 Medicago truncatula
Medtr3g110200 2.0kb downstream 2.0kb downstream 2000 false chr3: 51212208-51214207 Medicago truncatula
Medtr3g110200 5.0kb upstream 5.0kb upstream 7974 true chr3: 51204234-51212207 Medicago truncatula
Medtr3g110200 5.0kb upstream 5.0kb upstream 5000 false chr3: 51204234-51209233 Medicago truncatula
Medtr3g110200 5.0kb downstream 5.0kb downstream 7974 true chr3: 51209234-51217207 Medicago truncatula
Medtr3g110200 5.0kb downstream 5.0kb downstream 5000 false chr3: 51212208-51217207 Medicago truncatula
Medtr3g110200 10.0kb upstream 10.0kb upstream 12974 true chr3: 51199234-51212207 Medicago truncatula
Medtr3g110200 10.0kb upstream 10.0kb upstream 10000 false chr3: 51199234-51209233 Medicago truncatula
Medtr3g110200 10.0kb downstream 10.0kb downstream 12974 true chr3: 51209234-51222207 Medicago truncatula
Medtr3g110200 10.0kb downstream 10.0kb downstream 10000 false chr3: 51212208-51222207 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792376 5273 Angiosperm View MSA
122296823 5265 Fabidae View MSA
124067296 5270 Rosid View MSA
123744502 5271 Pentapetalae View MSA
122797581 5272 Eudicot View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.054        
cufflinks 1.202        
cufflinks 1.257        
cufflinks 0.223       Low
cufflinks 1.349        
cufflinks 0.123     Low Low
cufflinks 1.586        
cufflinks 0.987        
cufflinks 1.337        

0 Strain