Gene : Medtr3g111020 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11206:SF92 - MATE EFFLUX FAMILY PROTEIN Description:  MATE efflux family protein
Genomic Order:  6271 Name:  ? Medtr3g111020
Secondary Identifier:  ? PAC:31053812
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g111020 0.5kb upstream 0.5kb upstream 2933 true chr3: 51873016-51875948 Medicago truncatula
Medtr3g111020 0.5kb upstream 0.5kb upstream 500 false chr3: 51873016-51873515 Medicago truncatula
Medtr3g111020 0.5kb downstream 0.5kb downstream 2933 true chr3: 51873516-51876448 Medicago truncatula
Medtr3g111020 0.5kb downstream 0.5kb downstream 500 false chr3: 51875949-51876448 Medicago truncatula
Medtr3g111020 1.0kb upstream 1.0kb upstream 3433 true chr3: 51872516-51875948 Medicago truncatula
Medtr3g111020 1.0kb upstream 1.0kb upstream 1000 false chr3: 51872516-51873515 Medicago truncatula
Medtr3g111020 1.0kb downstream 1.0kb downstream 3433 true chr3: 51873516-51876948 Medicago truncatula
Medtr3g111020 1.0kb downstream 1.0kb downstream 1000 false chr3: 51875949-51876948 Medicago truncatula
Medtr3g111020 2.0kb upstream 2.0kb upstream 4433 true chr3: 51871516-51875948 Medicago truncatula
Medtr3g111020 2.0kb upstream 2.0kb upstream 2000 false chr3: 51871516-51873515 Medicago truncatula
Medtr3g111020 2.0kb downstream 2.0kb downstream 4433 true chr3: 51873516-51877948 Medicago truncatula
Medtr3g111020 2.0kb downstream 2.0kb downstream 2000 false chr3: 51875949-51877948 Medicago truncatula
Medtr3g111020 5.0kb upstream 5.0kb upstream 7433 true chr3: 51868516-51875948 Medicago truncatula
Medtr3g111020 5.0kb upstream 5.0kb upstream 5000 false chr3: 51868516-51873515 Medicago truncatula
Medtr3g111020 5.0kb downstream 5.0kb downstream 7433 true chr3: 51873516-51880948 Medicago truncatula
Medtr3g111020 5.0kb downstream 5.0kb downstream 5000 false chr3: 51875949-51880948 Medicago truncatula
Medtr3g111020 10.0kb upstream 10.0kb upstream 12433 true chr3: 51863516-51875948 Medicago truncatula
Medtr3g111020 10.0kb upstream 10.0kb upstream 10000 false chr3: 51863516-51873515 Medicago truncatula
Medtr3g111020 10.0kb downstream 10.0kb downstream 12433 true chr3: 51873516-51885948 Medicago truncatula
Medtr3g111020 10.0kb downstream 10.0kb downstream 10000 false chr3: 51875949-51885948 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313961 5265 Fabidae View MSA
124064495 5270 Rosid View MSA
123738593 5271 Pentapetalae View MSA
122792210 5272 Eudicot View MSA
122050809 5273 Angiosperm View MSA
121344541 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.717     High High
cufflinks 1.023        
cufflinks 0.34       Low
cufflinks 0.703        
cufflinks 0.643        
cufflinks 0.362        
cufflinks 1.961        
cufflinks 0.926        
cufflinks 1.293        

0 Strain