Gene : Medtr3g112280 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.4.1.245 - Alpha,alpha-trehalose synthase / Trehalose synthetase Description:  group 1 family glycosyltransferase
Genomic Order:  6368 Name:  ? Medtr3g112280
Secondary Identifier:  ? PAC:31059183
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g112280 0.5kb upstream 0.5kb upstream 5377 true chr3: 52575999-52581375 Medicago truncatula
Medtr3g112280 0.5kb upstream 0.5kb upstream 500 false chr3: 52580876-52581375 Medicago truncatula
Medtr3g112280 0.5kb downstream 0.5kb downstream 5377 true chr3: 52575499-52580875 Medicago truncatula
Medtr3g112280 0.5kb downstream 0.5kb downstream 500 false chr3: 52575499-52575998 Medicago truncatula
Medtr3g112280 1.0kb upstream 1.0kb upstream 5877 true chr3: 52575999-52581875 Medicago truncatula
Medtr3g112280 1.0kb upstream 1.0kb upstream 1000 false chr3: 52580876-52581875 Medicago truncatula
Medtr3g112280 1.0kb downstream 1.0kb downstream 5877 true chr3: 52574999-52580875 Medicago truncatula
Medtr3g112280 1.0kb downstream 1.0kb downstream 1000 false chr3: 52574999-52575998 Medicago truncatula
Medtr3g112280 2.0kb upstream 2.0kb upstream 6877 true chr3: 52575999-52582875 Medicago truncatula
Medtr3g112280 2.0kb upstream 2.0kb upstream 2000 false chr3: 52580876-52582875 Medicago truncatula
Medtr3g112280 2.0kb downstream 2.0kb downstream 6877 true chr3: 52573999-52580875 Medicago truncatula
Medtr3g112280 2.0kb downstream 2.0kb downstream 2000 false chr3: 52573999-52575998 Medicago truncatula
Medtr3g112280 5.0kb upstream 5.0kb upstream 9877 true chr3: 52575999-52585875 Medicago truncatula
Medtr3g112280 5.0kb upstream 5.0kb upstream 5000 false chr3: 52580876-52585875 Medicago truncatula
Medtr3g112280 5.0kb downstream 5.0kb downstream 9877 true chr3: 52570999-52580875 Medicago truncatula
Medtr3g112280 5.0kb downstream 5.0kb downstream 5000 false chr3: 52570999-52575998 Medicago truncatula
Medtr3g112280 10.0kb upstream 10.0kb upstream 14877 true chr3: 52575999-52590875 Medicago truncatula
Medtr3g112280 10.0kb upstream 10.0kb upstream 10000 false chr3: 52580876-52590875 Medicago truncatula
Medtr3g112280 10.0kb downstream 10.0kb downstream 14877 true chr3: 52565999-52580875 Medicago truncatula
Medtr3g112280 10.0kb downstream 10.0kb downstream 10000 false chr3: 52565999-52575998 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043473 5273 Angiosperm View MSA
122309718 5265 Fabidae View MSA
124065607 5270 Rosid View MSA
123746815 5271 Pentapetalae View MSA
122786445 5272 Eudicot View MSA
121310134 5274 Embryophyte View MSA
123347706 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.151        
cufflinks 2.458        
cufflinks 2.209        
cufflinks 0.558        
cufflinks 3.46       High
cufflinks 0.355       Low
cufflinks 0.63        
cufflinks 1.737        
cufflinks 0.966        

0 Strain