Gene : Medtr3g104400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11040//PTHR11040:SF52 - ZINC/IRON TRANSPORTER Description:  ZIP zinc/iron transport family protein
Genomic Order:  5740 Name:  ? Medtr3g104400
Secondary Identifier:  ? PAC:31060129
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104400 0.5kb upstream 0.5kb upstream 4639 true chr3: 48077521-48082159 Medicago truncatula
Medtr3g104400 0.5kb upstream 0.5kb upstream 500 false chr3: 48081660-48082159 Medicago truncatula
Medtr3g104400 0.5kb downstream 0.5kb downstream 4639 true chr3: 48077021-48081659 Medicago truncatula
Medtr3g104400 0.5kb downstream 0.5kb downstream 500 false chr3: 48077021-48077520 Medicago truncatula
Medtr3g104400 1.0kb upstream 1.0kb upstream 5139 true chr3: 48077521-48082659 Medicago truncatula
Medtr3g104400 1.0kb upstream 1.0kb upstream 1000 false chr3: 48081660-48082659 Medicago truncatula
Medtr3g104400 1.0kb downstream 1.0kb downstream 5139 true chr3: 48076521-48081659 Medicago truncatula
Medtr3g104400 1.0kb downstream 1.0kb downstream 1000 false chr3: 48076521-48077520 Medicago truncatula
Medtr3g104400 2.0kb upstream 2.0kb upstream 6139 true chr3: 48077521-48083659 Medicago truncatula
Medtr3g104400 2.0kb upstream 2.0kb upstream 2000 false chr3: 48081660-48083659 Medicago truncatula
Medtr3g104400 2.0kb downstream 2.0kb downstream 6139 true chr3: 48075521-48081659 Medicago truncatula
Medtr3g104400 2.0kb downstream 2.0kb downstream 2000 false chr3: 48075521-48077520 Medicago truncatula
Medtr3g104400 5.0kb upstream 5.0kb upstream 9139 true chr3: 48077521-48086659 Medicago truncatula
Medtr3g104400 5.0kb upstream 5.0kb upstream 5000 false chr3: 48081660-48086659 Medicago truncatula
Medtr3g104400 5.0kb downstream 5.0kb downstream 9139 true chr3: 48072521-48081659 Medicago truncatula
Medtr3g104400 5.0kb downstream 5.0kb downstream 5000 false chr3: 48072521-48077520 Medicago truncatula
Medtr3g104400 10.0kb upstream 10.0kb upstream 14139 true chr3: 48077521-48091659 Medicago truncatula
Medtr3g104400 10.0kb upstream 10.0kb upstream 10000 false chr3: 48081660-48091659 Medicago truncatula
Medtr3g104400 10.0kb downstream 10.0kb downstream 14139 true chr3: 48067521-48081659 Medicago truncatula
Medtr3g104400 10.0kb downstream 10.0kb downstream 10000 false chr3: 48067521-48077520 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307596 5265 Fabidae View MSA
124066491 5270 Rosid View MSA
123743015 5271 Pentapetalae View MSA
122796517 5272 Eudicot View MSA
122042436 5273 Angiosperm View MSA
121350029 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.443       Low
cufflinks 5.047       High
cufflinks 5.512       High
cufflinks 2.323        
cufflinks 1.473        
cufflinks 0.861       Low
cufflinks 2.929        
cufflinks 2.44        
cufflinks 2.118        

0 Strain