Gene : Medtr3g104730 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG3481 - Uncharacterized conserved protein Description:  protein phosphatase 2C
Genomic Order:  5769 Name:  ? Medtr3g104730
Secondary Identifier:  ? PAC:31053674
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104730 0.5kb upstream 0.5kb upstream 1340 true chr3: 48282817-48284156 Medicago truncatula
Medtr3g104730 0.5kb upstream 0.5kb upstream 500 false chr3: 48282817-48283316 Medicago truncatula
Medtr3g104730 0.5kb downstream 0.5kb downstream 1340 true chr3: 48283317-48284656 Medicago truncatula
Medtr3g104730 0.5kb downstream 0.5kb downstream 500 false chr3: 48284157-48284656 Medicago truncatula
Medtr3g104730 1.0kb upstream 1.0kb upstream 1840 true chr3: 48282317-48284156 Medicago truncatula
Medtr3g104730 1.0kb upstream 1.0kb upstream 1000 false chr3: 48282317-48283316 Medicago truncatula
Medtr3g104730 1.0kb downstream 1.0kb downstream 1840 true chr3: 48283317-48285156 Medicago truncatula
Medtr3g104730 1.0kb downstream 1.0kb downstream 1000 false chr3: 48284157-48285156 Medicago truncatula
Medtr3g104730 2.0kb upstream 2.0kb upstream 2840 true chr3: 48281317-48284156 Medicago truncatula
Medtr3g104730 2.0kb upstream 2.0kb upstream 2000 false chr3: 48281317-48283316 Medicago truncatula
Medtr3g104730 2.0kb downstream 2.0kb downstream 2840 true chr3: 48283317-48286156 Medicago truncatula
Medtr3g104730 2.0kb downstream 2.0kb downstream 2000 false chr3: 48284157-48286156 Medicago truncatula
Medtr3g104730 5.0kb upstream 5.0kb upstream 5840 true chr3: 48278317-48284156 Medicago truncatula
Medtr3g104730 5.0kb upstream 5.0kb upstream 5000 false chr3: 48278317-48283316 Medicago truncatula
Medtr3g104730 5.0kb downstream 5.0kb downstream 5840 true chr3: 48283317-48289156 Medicago truncatula
Medtr3g104730 5.0kb downstream 5.0kb downstream 5000 false chr3: 48284157-48289156 Medicago truncatula
Medtr3g104730 10.0kb upstream 10.0kb upstream 10840 true chr3: 48273317-48284156 Medicago truncatula
Medtr3g104730 10.0kb upstream 10.0kb upstream 10000 false chr3: 48273317-48283316 Medicago truncatula
Medtr3g104730 10.0kb downstream 10.0kb downstream 10840 true chr3: 48283317-48294156 Medicago truncatula
Medtr3g104730 10.0kb downstream 10.0kb downstream 10000 false chr3: 48284157-48294156 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310414 5265 Fabidae View MSA
124065636 5270 Rosid View MSA
123737457 5271 Pentapetalae View MSA
122786925 5272 Eudicot View MSA
122043759 5273 Angiosperm View MSA
121347036 5274 Embryophyte View MSA
123380483 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.854        
cufflinks 1.782       Low
cufflinks 2.797        
cufflinks 5.472        
cufflinks 2.875        
cufflinks 5.877        
cufflinks 6.598       High
cufflinks 1.721       Low
cufflinks 3.847        

0 Strain