Gene : Medtr3g104470 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR23076//PTHR23076:SF73 - METALLOPROTEASE M41 FTSH Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  5745 Name:  ? Medtr3g104470
Secondary Identifier:  ? PAC:31054399
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104470 0.5kb upstream 0.5kb upstream 5600 true chr3: 48111470-48117069 Medicago truncatula
Medtr3g104470 0.5kb upstream 0.5kb upstream 500 false chr3: 48116570-48117069 Medicago truncatula
Medtr3g104470 0.5kb downstream 0.5kb downstream 5600 true chr3: 48110970-48116569 Medicago truncatula
Medtr3g104470 0.5kb downstream 0.5kb downstream 500 false chr3: 48110970-48111469 Medicago truncatula
Medtr3g104470 1.0kb upstream 1.0kb upstream 6100 true chr3: 48111470-48117569 Medicago truncatula
Medtr3g104470 1.0kb upstream 1.0kb upstream 1000 false chr3: 48116570-48117569 Medicago truncatula
Medtr3g104470 1.0kb downstream 1.0kb downstream 6100 true chr3: 48110470-48116569 Medicago truncatula
Medtr3g104470 1.0kb downstream 1.0kb downstream 1000 false chr3: 48110470-48111469 Medicago truncatula
Medtr3g104470 2.0kb upstream 2.0kb upstream 7100 true chr3: 48111470-48118569 Medicago truncatula
Medtr3g104470 2.0kb upstream 2.0kb upstream 2000 false chr3: 48116570-48118569 Medicago truncatula
Medtr3g104470 2.0kb downstream 2.0kb downstream 7100 true chr3: 48109470-48116569 Medicago truncatula
Medtr3g104470 2.0kb downstream 2.0kb downstream 2000 false chr3: 48109470-48111469 Medicago truncatula
Medtr3g104470 5.0kb upstream 5.0kb upstream 10100 true chr3: 48111470-48121569 Medicago truncatula
Medtr3g104470 5.0kb upstream 5.0kb upstream 5000 false chr3: 48116570-48121569 Medicago truncatula
Medtr3g104470 5.0kb downstream 5.0kb downstream 10100 true chr3: 48106470-48116569 Medicago truncatula
Medtr3g104470 5.0kb downstream 5.0kb downstream 5000 false chr3: 48106470-48111469 Medicago truncatula
Medtr3g104470 10.0kb upstream 10.0kb upstream 15100 true chr3: 48111470-48126569 Medicago truncatula
Medtr3g104470 10.0kb upstream 10.0kb upstream 10000 false chr3: 48116570-48126569 Medicago truncatula
Medtr3g104470 10.0kb downstream 10.0kb downstream 15100 true chr3: 48101470-48116569 Medicago truncatula
Medtr3g104470 10.0kb downstream 10.0kb downstream 10000 false chr3: 48101470-48111469 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306895 5265 Fabidae View MSA
124073797 5270 Rosid View MSA
123744222 5271 Pentapetalae View MSA
122793624 5272 Eudicot View MSA
122043793 5273 Angiosperm View MSA
121346284 5274 Embryophyte View MSA
123428638 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.441     High  
cufflinks 16.407     High  
cufflinks 13.942     High  
cufflinks 12.473     High  
cufflinks 15.309     High  
cufflinks 8.515       Low
cufflinks 16.409     High  
cufflinks 13.232     High  
cufflinks 19.55     High High

0 Strain