Gene : Medtr3g104560 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24301:SF2 - CYTOCHROME P450 711A1 Description:  cytochrome P450 family protein
Genomic Order:  5754 Name:  ? Medtr3g104560
Secondary Identifier:  ? PAC:31054885
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6398 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104560 0.5kb upstream 0.5kb upstream 9486 true chr3: 48174924-48184409 Medicago truncatula
Medtr3g104560 0.5kb upstream 0.5kb upstream 500 false chr3: 48174924-48175423 Medicago truncatula
Medtr3g104560 0.5kb downstream 0.5kb downstream 9486 true chr3: 48175424-48184909 Medicago truncatula
Medtr3g104560 0.5kb downstream 0.5kb downstream 500 false chr3: 48184410-48184909 Medicago truncatula
Medtr3g104560 1.0kb upstream 1.0kb upstream 9986 true chr3: 48174424-48184409 Medicago truncatula
Medtr3g104560 1.0kb upstream 1.0kb upstream 1000 false chr3: 48174424-48175423 Medicago truncatula
Medtr3g104560 1.0kb downstream 1.0kb downstream 9986 true chr3: 48175424-48185409 Medicago truncatula
Medtr3g104560 1.0kb downstream 1.0kb downstream 1000 false chr3: 48184410-48185409 Medicago truncatula
Medtr3g104560 2.0kb upstream 2.0kb upstream 10986 true chr3: 48173424-48184409 Medicago truncatula
Medtr3g104560 2.0kb upstream 2.0kb upstream 2000 false chr3: 48173424-48175423 Medicago truncatula
Medtr3g104560 2.0kb downstream 2.0kb downstream 10986 true chr3: 48175424-48186409 Medicago truncatula
Medtr3g104560 2.0kb downstream 2.0kb downstream 2000 false chr3: 48184410-48186409 Medicago truncatula
Medtr3g104560 5.0kb upstream 5.0kb upstream 13986 true chr3: 48170424-48184409 Medicago truncatula
Medtr3g104560 5.0kb upstream 5.0kb upstream 5000 false chr3: 48170424-48175423 Medicago truncatula
Medtr3g104560 5.0kb downstream 5.0kb downstream 13986 true chr3: 48175424-48189409 Medicago truncatula
Medtr3g104560 5.0kb downstream 5.0kb downstream 5000 false chr3: 48184410-48189409 Medicago truncatula
Medtr3g104560 10.0kb upstream 10.0kb upstream 18986 true chr3: 48165424-48184409 Medicago truncatula
Medtr3g104560 10.0kb upstream 10.0kb upstream 10000 false chr3: 48165424-48175423 Medicago truncatula
Medtr3g104560 10.0kb downstream 10.0kb downstream 18986 true chr3: 48175424-48194409 Medicago truncatula
Medtr3g104560 10.0kb downstream 10.0kb downstream 10000 false chr3: 48184410-48194409 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311228 5265 Fabidae View MSA
124063797 5270 Rosid View MSA
123749479 5271 Pentapetalae View MSA
122792972 5272 Eudicot View MSA
122047544 5273 Angiosperm View MSA
123429088 5275 Viridiplantae View MSA
121347167 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.109        
cufflinks 0.119       Low
cufflinks 0.797        
cufflinks 1.751        
cufflinks 0.211       Low
cufflinks 2.131        
cufflinks 5.021       High
cufflinks 0.372        
cufflinks 4.689       High

0 Strain