Gene : Medtr3g104550 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10015:SF186 - HEAT STRESS TRANSCRIPTION FACTOR A-2-RELATED Description:  heat shock transcription factor A3
Genomic Order:  5752 Name:  ? Medtr3g104550
Secondary Identifier:  ? PAC:31059758
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g104550 0.5kb upstream 0.5kb upstream 1879 true chr3: 48170009-48171887 Medicago truncatula
Medtr3g104550 0.5kb upstream 0.5kb upstream 500 false chr3: 48170009-48170508 Medicago truncatula
Medtr3g104550 0.5kb downstream 0.5kb downstream 1879 true chr3: 48170509-48172387 Medicago truncatula
Medtr3g104550 0.5kb downstream 0.5kb downstream 500 false chr3: 48171888-48172387 Medicago truncatula
Medtr3g104550 1.0kb upstream 1.0kb upstream 2379 true chr3: 48169509-48171887 Medicago truncatula
Medtr3g104550 1.0kb upstream 1.0kb upstream 1000 false chr3: 48169509-48170508 Medicago truncatula
Medtr3g104550 1.0kb downstream 1.0kb downstream 2379 true chr3: 48170509-48172887 Medicago truncatula
Medtr3g104550 1.0kb downstream 1.0kb downstream 1000 false chr3: 48171888-48172887 Medicago truncatula
Medtr3g104550 2.0kb upstream 2.0kb upstream 3379 true chr3: 48168509-48171887 Medicago truncatula
Medtr3g104550 2.0kb upstream 2.0kb upstream 2000 false chr3: 48168509-48170508 Medicago truncatula
Medtr3g104550 2.0kb downstream 2.0kb downstream 3379 true chr3: 48170509-48173887 Medicago truncatula
Medtr3g104550 2.0kb downstream 2.0kb downstream 2000 false chr3: 48171888-48173887 Medicago truncatula
Medtr3g104550 5.0kb upstream 5.0kb upstream 6379 true chr3: 48165509-48171887 Medicago truncatula
Medtr3g104550 5.0kb upstream 5.0kb upstream 5000 false chr3: 48165509-48170508 Medicago truncatula
Medtr3g104550 5.0kb downstream 5.0kb downstream 6379 true chr3: 48170509-48176887 Medicago truncatula
Medtr3g104550 5.0kb downstream 5.0kb downstream 5000 false chr3: 48171888-48176887 Medicago truncatula
Medtr3g104550 10.0kb upstream 10.0kb upstream 11379 true chr3: 48160509-48171887 Medicago truncatula
Medtr3g104550 10.0kb upstream 10.0kb upstream 10000 false chr3: 48160509-48170508 Medicago truncatula
Medtr3g104550 10.0kb downstream 10.0kb downstream 11379 true chr3: 48170509-48181887 Medicago truncatula
Medtr3g104550 10.0kb downstream 10.0kb downstream 10000 false chr3: 48171888-48181887 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309723 5265 Fabidae View MSA
124060491 5270 Rosid View MSA
123737579 5271 Pentapetalae View MSA
122795301 5272 Eudicot View MSA
122049112 5273 Angiosperm View MSA
121311252 5274 Embryophyte View MSA
123428852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.436     High High
cufflinks 0.576        
cufflinks 0.647        
cufflinks 0.183       Low
cufflinks 1.212        
cufflinks 1.37        
cufflinks 2.299        
cufflinks 0.496        
cufflinks 1.032        

0 Strain