Gene : Medtr3g106480 M. truncatula Mt4.0v1
Defline:  (1 of 11) PTHR13806 - FLOTILLIN-RELATED Description:  SPFH/band 7/PHB domain membrane-associated family protein
Genomic Order:  5893 Name:  ? Medtr3g106480
Secondary Identifier:  ? PAC:31059798
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g106480 0.5kb upstream 0.5kb upstream 2941 true chr3: 49206711-49209651 Medicago truncatula
Medtr3g106480 0.5kb upstream 0.5kb upstream 500 false chr3: 49209152-49209651 Medicago truncatula
Medtr3g106480 0.5kb downstream 0.5kb downstream 2941 true chr3: 49206211-49209151 Medicago truncatula
Medtr3g106480 0.5kb downstream 0.5kb downstream 500 false chr3: 49206211-49206710 Medicago truncatula
Medtr3g106480 1.0kb upstream 1.0kb upstream 3441 true chr3: 49206711-49210151 Medicago truncatula
Medtr3g106480 1.0kb upstream 1.0kb upstream 1000 false chr3: 49209152-49210151 Medicago truncatula
Medtr3g106480 1.0kb downstream 1.0kb downstream 3441 true chr3: 49205711-49209151 Medicago truncatula
Medtr3g106480 1.0kb downstream 1.0kb downstream 1000 false chr3: 49205711-49206710 Medicago truncatula
Medtr3g106480 2.0kb upstream 2.0kb upstream 4441 true chr3: 49206711-49211151 Medicago truncatula
Medtr3g106480 2.0kb upstream 2.0kb upstream 2000 false chr3: 49209152-49211151 Medicago truncatula
Medtr3g106480 2.0kb downstream 2.0kb downstream 4441 true chr3: 49204711-49209151 Medicago truncatula
Medtr3g106480 2.0kb downstream 2.0kb downstream 2000 false chr3: 49204711-49206710 Medicago truncatula
Medtr3g106480 5.0kb upstream 5.0kb upstream 7441 true chr3: 49206711-49214151 Medicago truncatula
Medtr3g106480 5.0kb upstream 5.0kb upstream 5000 false chr3: 49209152-49214151 Medicago truncatula
Medtr3g106480 5.0kb downstream 5.0kb downstream 7441 true chr3: 49201711-49209151 Medicago truncatula
Medtr3g106480 5.0kb downstream 5.0kb downstream 5000 false chr3: 49201711-49206710 Medicago truncatula
Medtr3g106480 10.0kb upstream 10.0kb upstream 12441 true chr3: 49206711-49219151 Medicago truncatula
Medtr3g106480 10.0kb upstream 10.0kb upstream 10000 false chr3: 49209152-49219151 Medicago truncatula
Medtr3g106480 10.0kb downstream 10.0kb downstream 12441 true chr3: 49196711-49209151 Medicago truncatula
Medtr3g106480 10.0kb downstream 10.0kb downstream 10000 false chr3: 49196711-49206710 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304716 5265 Fabidae View MSA
124060945 5270 Rosid View MSA
123742002 5271 Pentapetalae View MSA
122786669 5272 Eudicot View MSA
122043922 5273 Angiosperm View MSA
121351294 5274 Embryophyte View MSA
123427919 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.032     Low Low
cufflinks 0.344        
cufflinks 0.668       High
cufflinks 0.059     Low  
cufflinks 0.91       High
cufflinks 0.226        
cufflinks 0.022     Low Low
cufflinks 0.403        
cufflinks 0.163        

0 Strain