Gene : Medtr3g107960 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF02135//PF08214 - TAZ zinc finger (zf-TAZ) // Histone acetylation protein (HAT_KAT11) Description:  histone acetylation protein
Genomic Order:  5998 Name:  ? Medtr3g107960
Secondary Identifier:  ? PAC:31059903
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g107960 0.5kb upstream 0.5kb upstream 7339 true chr3: 49877005-49884343 Medicago truncatula
Medtr3g107960 0.5kb upstream 0.5kb upstream 500 false chr3: 49877005-49877504 Medicago truncatula
Medtr3g107960 0.5kb downstream 0.5kb downstream 7339 true chr3: 49877505-49884843 Medicago truncatula
Medtr3g107960 0.5kb downstream 0.5kb downstream 500 false chr3: 49884344-49884843 Medicago truncatula
Medtr3g107960 1.0kb upstream 1.0kb upstream 7839 true chr3: 49876505-49884343 Medicago truncatula
Medtr3g107960 1.0kb upstream 1.0kb upstream 1000 false chr3: 49876505-49877504 Medicago truncatula
Medtr3g107960 1.0kb downstream 1.0kb downstream 7839 true chr3: 49877505-49885343 Medicago truncatula
Medtr3g107960 1.0kb downstream 1.0kb downstream 1000 false chr3: 49884344-49885343 Medicago truncatula
Medtr3g107960 2.0kb upstream 2.0kb upstream 8839 true chr3: 49875505-49884343 Medicago truncatula
Medtr3g107960 2.0kb upstream 2.0kb upstream 2000 false chr3: 49875505-49877504 Medicago truncatula
Medtr3g107960 2.0kb downstream 2.0kb downstream 8839 true chr3: 49877505-49886343 Medicago truncatula
Medtr3g107960 2.0kb downstream 2.0kb downstream 2000 false chr3: 49884344-49886343 Medicago truncatula
Medtr3g107960 5.0kb upstream 5.0kb upstream 11839 true chr3: 49872505-49884343 Medicago truncatula
Medtr3g107960 5.0kb upstream 5.0kb upstream 5000 false chr3: 49872505-49877504 Medicago truncatula
Medtr3g107960 5.0kb downstream 5.0kb downstream 11839 true chr3: 49877505-49889343 Medicago truncatula
Medtr3g107960 5.0kb downstream 5.0kb downstream 5000 false chr3: 49884344-49889343 Medicago truncatula
Medtr3g107960 10.0kb upstream 10.0kb upstream 16839 true chr3: 49867505-49884343 Medicago truncatula
Medtr3g107960 10.0kb upstream 10.0kb upstream 10000 false chr3: 49867505-49877504 Medicago truncatula
Medtr3g107960 10.0kb downstream 10.0kb downstream 16839 true chr3: 49877505-49894343 Medicago truncatula
Medtr3g107960 10.0kb downstream 10.0kb downstream 10000 false chr3: 49884344-49894343 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313861 5265 Fabidae View MSA
124071330 5270 Rosid View MSA
123747682 5271 Pentapetalae View MSA
122772267 5272 Eudicot View MSA
122049603 5273 Angiosperm View MSA
121311498 5274 Embryophyte View MSA
123426645 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.691        
cufflinks 4.007        
cufflinks 4.773        
cufflinks 0.499       Low
cufflinks 5.097        
cufflinks 0.943        
cufflinks 1.906        
cufflinks 4.073        
cufflinks 0.963        

0 Strain