Gene : Medtr4g020670 M. truncatula Mt4.0v1
Defline:  (1 of 32) PF01107 - Viral movement protein (MP) (MP) Description:  viral movement protein
Genomic Order:  878 Name:  ? Medtr4g020670
Secondary Identifier:  ? PAC:31108295
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g020670 0.5kb upstream 0.5kb upstream 2153 true chr4: 6633469-6635621 Medicago truncatula
Medtr4g020670 0.5kb upstream 0.5kb upstream 500 false chr4: 6633469-6633968 Medicago truncatula
Medtr4g020670 0.5kb downstream 0.5kb downstream 2153 true chr4: 6633969-6636121 Medicago truncatula
Medtr4g020670 0.5kb downstream 0.5kb downstream 500 false chr4: 6635622-6636121 Medicago truncatula
Medtr4g020670 1.0kb upstream 1.0kb upstream 2653 true chr4: 6632969-6635621 Medicago truncatula
Medtr4g020670 1.0kb upstream 1.0kb upstream 1000 false chr4: 6632969-6633968 Medicago truncatula
Medtr4g020670 1.0kb downstream 1.0kb downstream 2653 true chr4: 6633969-6636621 Medicago truncatula
Medtr4g020670 1.0kb downstream 1.0kb downstream 1000 false chr4: 6635622-6636621 Medicago truncatula
Medtr4g020670 2.0kb upstream 2.0kb upstream 3653 true chr4: 6631969-6635621 Medicago truncatula
Medtr4g020670 2.0kb upstream 2.0kb upstream 2000 false chr4: 6631969-6633968 Medicago truncatula
Medtr4g020670 2.0kb downstream 2.0kb downstream 3653 true chr4: 6633969-6637621 Medicago truncatula
Medtr4g020670 2.0kb downstream 2.0kb downstream 2000 false chr4: 6635622-6637621 Medicago truncatula
Medtr4g020670 5.0kb upstream 5.0kb upstream 6653 true chr4: 6628969-6635621 Medicago truncatula
Medtr4g020670 5.0kb upstream 5.0kb upstream 5000 false chr4: 6628969-6633968 Medicago truncatula
Medtr4g020670 5.0kb downstream 5.0kb downstream 6653 true chr4: 6633969-6640621 Medicago truncatula
Medtr4g020670 5.0kb downstream 5.0kb downstream 5000 false chr4: 6635622-6640621 Medicago truncatula
Medtr4g020670 10.0kb upstream 10.0kb upstream 11653 true chr4: 6623969-6635621 Medicago truncatula
Medtr4g020670 10.0kb upstream 10.0kb upstream 10000 false chr4: 6623969-6633968 Medicago truncatula
Medtr4g020670 10.0kb downstream 10.0kb downstream 11653 true chr4: 6633969-6645621 Medicago truncatula
Medtr4g020670 10.0kb downstream 10.0kb downstream 10000 false chr4: 6635622-6645621 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122288761 5265 Fabidae View MSA
124028953 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.103        
cufflinks 0.201        
cufflinks 0.144        
cufflinks 0.112        
cufflinks 0.148        
cufflinks 1.273       High
cufflinks 0.201        
cufflinks 0.082        
cufflinks 0.121        

0 Strain