Gene : Medtr4g034030 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11700//PTHR11700:SF10 - 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER Description:  40S ribosomal protein S20-2
Genomic Order:  1595 Name:  ? Medtr4g034030
Secondary Identifier:  ? PAC:31113073
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g034030 0.5kb upstream 0.5kb upstream 3523 true chr4: 12493297-12496819 Medicago truncatula
Medtr4g034030 0.5kb upstream 0.5kb upstream 500 false chr4: 12493297-12493796 Medicago truncatula
Medtr4g034030 0.5kb downstream 0.5kb downstream 3523 true chr4: 12493797-12497319 Medicago truncatula
Medtr4g034030 0.5kb downstream 0.5kb downstream 500 false chr4: 12496820-12497319 Medicago truncatula
Medtr4g034030 1.0kb upstream 1.0kb upstream 4023 true chr4: 12492797-12496819 Medicago truncatula
Medtr4g034030 1.0kb upstream 1.0kb upstream 1000 false chr4: 12492797-12493796 Medicago truncatula
Medtr4g034030 1.0kb downstream 1.0kb downstream 4023 true chr4: 12493797-12497819 Medicago truncatula
Medtr4g034030 1.0kb downstream 1.0kb downstream 1000 false chr4: 12496820-12497819 Medicago truncatula
Medtr4g034030 2.0kb upstream 2.0kb upstream 5023 true chr4: 12491797-12496819 Medicago truncatula
Medtr4g034030 2.0kb upstream 2.0kb upstream 2000 false chr4: 12491797-12493796 Medicago truncatula
Medtr4g034030 2.0kb downstream 2.0kb downstream 5023 true chr4: 12493797-12498819 Medicago truncatula
Medtr4g034030 2.0kb downstream 2.0kb downstream 2000 false chr4: 12496820-12498819 Medicago truncatula
Medtr4g034030 5.0kb upstream 5.0kb upstream 8023 true chr4: 12488797-12496819 Medicago truncatula
Medtr4g034030 5.0kb upstream 5.0kb upstream 5000 false chr4: 12488797-12493796 Medicago truncatula
Medtr4g034030 5.0kb downstream 5.0kb downstream 8023 true chr4: 12493797-12501819 Medicago truncatula
Medtr4g034030 5.0kb downstream 5.0kb downstream 5000 false chr4: 12496820-12501819 Medicago truncatula
Medtr4g034030 10.0kb upstream 10.0kb upstream 13023 true chr4: 12483797-12496819 Medicago truncatula
Medtr4g034030 10.0kb upstream 10.0kb upstream 10000 false chr4: 12483797-12493796 Medicago truncatula
Medtr4g034030 10.0kb downstream 10.0kb downstream 13023 true chr4: 12493797-12506819 Medicago truncatula
Medtr4g034030 10.0kb downstream 10.0kb downstream 10000 false chr4: 12496820-12506819 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309868 5265 Fabidae View MSA
124068920 5270 Rosid View MSA
123743222 5271 Pentapetalae View MSA
122791885 5272 Eudicot View MSA
122044190 5273 Angiosperm View MSA
121349858 5274 Embryophyte View MSA
123426171 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.444        
cufflinks 0.38       Low
cufflinks 0.417        
cufflinks 0.867       High
cufflinks 0.732        
cufflinks 0.419        
cufflinks 1.159       High
cufflinks 0.495        
cufflinks 0.706        

0 Strain