Gene : Medtr4g028080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR13509:SF2 - PREPROTEIN TRANSLOCASE SEC, SEC61-BETA SUBUNIT PROTEIN-RELATED Description:  protein transporter Sec61 subunit beta-like protein
Genomic Order:  1263 Name:  ? Medtr4g028080
Secondary Identifier:  ? PAC:31112187
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g028080 0.5kb upstream 0.5kb upstream 2682 true chr4: 9674809-9677490 Medicago truncatula
Medtr4g028080 0.5kb upstream 0.5kb upstream 500 false chr4: 9674809-9675308 Medicago truncatula
Medtr4g028080 0.5kb downstream 0.5kb downstream 2682 true chr4: 9675309-9677990 Medicago truncatula
Medtr4g028080 0.5kb downstream 0.5kb downstream 500 false chr4: 9677491-9677990 Medicago truncatula
Medtr4g028080 1.0kb upstream 1.0kb upstream 3182 true chr4: 9674309-9677490 Medicago truncatula
Medtr4g028080 1.0kb upstream 1.0kb upstream 1000 false chr4: 9674309-9675308 Medicago truncatula
Medtr4g028080 1.0kb downstream 1.0kb downstream 3182 true chr4: 9675309-9678490 Medicago truncatula
Medtr4g028080 1.0kb downstream 1.0kb downstream 1000 false chr4: 9677491-9678490 Medicago truncatula
Medtr4g028080 2.0kb upstream 2.0kb upstream 4182 true chr4: 9673309-9677490 Medicago truncatula
Medtr4g028080 2.0kb upstream 2.0kb upstream 2000 false chr4: 9673309-9675308 Medicago truncatula
Medtr4g028080 2.0kb downstream 2.0kb downstream 4182 true chr4: 9675309-9679490 Medicago truncatula
Medtr4g028080 2.0kb downstream 2.0kb downstream 2000 false chr4: 9677491-9679490 Medicago truncatula
Medtr4g028080 5.0kb upstream 5.0kb upstream 7182 true chr4: 9670309-9677490 Medicago truncatula
Medtr4g028080 5.0kb upstream 5.0kb upstream 5000 false chr4: 9670309-9675308 Medicago truncatula
Medtr4g028080 5.0kb downstream 5.0kb downstream 7182 true chr4: 9675309-9682490 Medicago truncatula
Medtr4g028080 5.0kb downstream 5.0kb downstream 5000 false chr4: 9677491-9682490 Medicago truncatula
Medtr4g028080 10.0kb upstream 10.0kb upstream 12182 true chr4: 9665309-9677490 Medicago truncatula
Medtr4g028080 10.0kb upstream 10.0kb upstream 10000 false chr4: 9665309-9675308 Medicago truncatula
Medtr4g028080 10.0kb downstream 10.0kb downstream 12182 true chr4: 9675309-9687490 Medicago truncatula
Medtr4g028080 10.0kb downstream 10.0kb downstream 10000 false chr4: 9677491-9687490 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314120 5265 Fabidae View MSA
124074304 5270 Rosid View MSA
123751679 5271 Pentapetalae View MSA
122797593 5272 Eudicot View MSA
122044826 5273 Angiosperm View MSA
121346729 5274 Embryophyte View MSA
123426765 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 35.838     High  
cufflinks 19.686     High  
cufflinks 13.392     High Low
cufflinks 181.62     High High
cufflinks 16.122     High  
cufflinks 332.857     High High
cufflinks 49.574     High  
cufflinks 15.442     High  
cufflinks 61.428     High  

0 Strain