Gene : Medtr4g014840 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15430 - FKBP-ASSOCIATED PROTEIN Description:  aberrant root formation protein
Genomic Order:  573 Name:  ? Medtr4g014840
Secondary Identifier:  ? PAC:31112162
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g014840 0.5kb upstream 0.5kb upstream 7876 true chr4: 4242500-4250375 Medicago truncatula
Medtr4g014840 0.5kb upstream 0.5kb upstream 500 false chr4: 4242500-4242999 Medicago truncatula
Medtr4g014840 0.5kb downstream 0.5kb downstream 7876 true chr4: 4243000-4250875 Medicago truncatula
Medtr4g014840 0.5kb downstream 0.5kb downstream 500 false chr4: 4250376-4250875 Medicago truncatula
Medtr4g014840 1.0kb upstream 1.0kb upstream 8376 true chr4: 4242000-4250375 Medicago truncatula
Medtr4g014840 1.0kb upstream 1.0kb upstream 1000 false chr4: 4242000-4242999 Medicago truncatula
Medtr4g014840 1.0kb downstream 1.0kb downstream 8376 true chr4: 4243000-4251375 Medicago truncatula
Medtr4g014840 1.0kb downstream 1.0kb downstream 1000 false chr4: 4250376-4251375 Medicago truncatula
Medtr4g014840 2.0kb upstream 2.0kb upstream 9376 true chr4: 4241000-4250375 Medicago truncatula
Medtr4g014840 2.0kb upstream 2.0kb upstream 2000 false chr4: 4241000-4242999 Medicago truncatula
Medtr4g014840 2.0kb downstream 2.0kb downstream 9376 true chr4: 4243000-4252375 Medicago truncatula
Medtr4g014840 2.0kb downstream 2.0kb downstream 2000 false chr4: 4250376-4252375 Medicago truncatula
Medtr4g014840 5.0kb upstream 5.0kb upstream 12376 true chr4: 4238000-4250375 Medicago truncatula
Medtr4g014840 5.0kb upstream 5.0kb upstream 5000 false chr4: 4238000-4242999 Medicago truncatula
Medtr4g014840 5.0kb downstream 5.0kb downstream 12376 true chr4: 4243000-4255375 Medicago truncatula
Medtr4g014840 5.0kb downstream 5.0kb downstream 5000 false chr4: 4250376-4255375 Medicago truncatula
Medtr4g014840 10.0kb upstream 10.0kb upstream 17376 true chr4: 4233000-4250375 Medicago truncatula
Medtr4g014840 10.0kb upstream 10.0kb upstream 10000 false chr4: 4233000-4242999 Medicago truncatula
Medtr4g014840 10.0kb downstream 10.0kb downstream 17376 true chr4: 4243000-4260375 Medicago truncatula
Medtr4g014840 10.0kb downstream 10.0kb downstream 10000 false chr4: 4250376-4260375 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301615 5265 Fabidae View MSA
124067957 5270 Rosid View MSA
123737009 5271 Pentapetalae View MSA
122791480 5272 Eudicot View MSA
122043939 5273 Angiosperm View MSA
121347412 5274 Embryophyte View MSA
123380542 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.315        
cufflinks 0.402        
cufflinks 0.483        
cufflinks 0.107       Low
cufflinks 0.541       High
cufflinks 0.106     Low Low
cufflinks 0.314        
cufflinks 0.377        
cufflinks 0.355        

0 Strain