Gene : Medtr4g005280 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31998:SF11 - PYROPHOSPHATE-ENERGIZED MEMBRANE PROTON PUMP 2-RELATED Description:  vacuolar H+-translocating inorganic pyrophosphatase
Genomic Order:  16 Name:  ? Medtr4g005280
Secondary Identifier:  ? PAC:31108305
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g005280 0.5kb upstream 0.5kb upstream 7416 true chr4: 172075-179490 Medicago truncatula
Medtr4g005280 0.5kb upstream 0.5kb upstream 500 false chr4: 172075-172574 Medicago truncatula
Medtr4g005280 0.5kb downstream 0.5kb downstream 7416 true chr4: 172575-179990 Medicago truncatula
Medtr4g005280 0.5kb downstream 0.5kb downstream 500 false chr4: 179491-179990 Medicago truncatula
Medtr4g005280 1.0kb upstream 1.0kb upstream 7916 true chr4: 171575-179490 Medicago truncatula
Medtr4g005280 1.0kb upstream 1.0kb upstream 1000 false chr4: 171575-172574 Medicago truncatula
Medtr4g005280 1.0kb downstream 1.0kb downstream 7916 true chr4: 172575-180490 Medicago truncatula
Medtr4g005280 1.0kb downstream 1.0kb downstream 1000 false chr4: 179491-180490 Medicago truncatula
Medtr4g005280 2.0kb upstream 2.0kb upstream 8916 true chr4: 170575-179490 Medicago truncatula
Medtr4g005280 2.0kb upstream 2.0kb upstream 2000 false chr4: 170575-172574 Medicago truncatula
Medtr4g005280 2.0kb downstream 2.0kb downstream 8916 true chr4: 172575-181490 Medicago truncatula
Medtr4g005280 2.0kb downstream 2.0kb downstream 2000 false chr4: 179491-181490 Medicago truncatula
Medtr4g005280 5.0kb upstream 5.0kb upstream 11916 true chr4: 167575-179490 Medicago truncatula
Medtr4g005280 5.0kb upstream 5.0kb upstream 5000 false chr4: 167575-172574 Medicago truncatula
Medtr4g005280 5.0kb downstream 5.0kb downstream 11916 true chr4: 172575-184490 Medicago truncatula
Medtr4g005280 5.0kb downstream 5.0kb downstream 5000 false chr4: 179491-184490 Medicago truncatula
Medtr4g005280 10.0kb upstream 10.0kb upstream 16916 true chr4: 162575-179490 Medicago truncatula
Medtr4g005280 10.0kb upstream 10.0kb upstream 10000 false chr4: 162575-172574 Medicago truncatula
Medtr4g005280 10.0kb downstream 10.0kb downstream 16916 true chr4: 172575-189490 Medicago truncatula
Medtr4g005280 10.0kb downstream 10.0kb downstream 10000 false chr4: 179491-189490 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302048 5265 Fabidae View MSA
124067461 5270 Rosid View MSA
123745513 5271 Pentapetalae View MSA
122786142 5272 Eudicot View MSA
122044345 5273 Angiosperm View MSA
121350028 5274 Embryophyte View MSA
123424450 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.101        
cufflinks 5.429        
cufflinks 3.938        
cufflinks 3.063        
cufflinks 7.963       High
cufflinks 0.568       Low
cufflinks 2.707        
cufflinks 3.259        
cufflinks 4.895        

0 Strain