Gene : Medtr4g008250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF07718 - Coatomer beta C-terminal region (Coatamer_beta_C) Description:  coatomer subunit beta
Genomic Order:  196 Name:  ? Medtr4g008250
Secondary Identifier:  ? PAC:31107570
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g008250 0.5kb upstream 0.5kb upstream 5736 true chr4: 1470407-1476142 Medicago truncatula
Medtr4g008250 0.5kb upstream 0.5kb upstream 500 false chr4: 1470407-1470906 Medicago truncatula
Medtr4g008250 0.5kb downstream 0.5kb downstream 5736 true chr4: 1470907-1476642 Medicago truncatula
Medtr4g008250 0.5kb downstream 0.5kb downstream 500 false chr4: 1476143-1476642 Medicago truncatula
Medtr4g008250 1.0kb upstream 1.0kb upstream 6236 true chr4: 1469907-1476142 Medicago truncatula
Medtr4g008250 1.0kb upstream 1.0kb upstream 1000 false chr4: 1469907-1470906 Medicago truncatula
Medtr4g008250 1.0kb downstream 1.0kb downstream 6236 true chr4: 1470907-1477142 Medicago truncatula
Medtr4g008250 1.0kb downstream 1.0kb downstream 1000 false chr4: 1476143-1477142 Medicago truncatula
Medtr4g008250 2.0kb upstream 2.0kb upstream 7236 true chr4: 1468907-1476142 Medicago truncatula
Medtr4g008250 2.0kb upstream 2.0kb upstream 2000 false chr4: 1468907-1470906 Medicago truncatula
Medtr4g008250 2.0kb downstream 2.0kb downstream 7236 true chr4: 1470907-1478142 Medicago truncatula
Medtr4g008250 2.0kb downstream 2.0kb downstream 2000 false chr4: 1476143-1478142 Medicago truncatula
Medtr4g008250 5.0kb upstream 5.0kb upstream 10236 true chr4: 1465907-1476142 Medicago truncatula
Medtr4g008250 5.0kb upstream 5.0kb upstream 5000 false chr4: 1465907-1470906 Medicago truncatula
Medtr4g008250 5.0kb downstream 5.0kb downstream 10236 true chr4: 1470907-1481142 Medicago truncatula
Medtr4g008250 5.0kb downstream 5.0kb downstream 5000 false chr4: 1476143-1481142 Medicago truncatula
Medtr4g008250 10.0kb upstream 10.0kb upstream 15236 true chr4: 1460907-1476142 Medicago truncatula
Medtr4g008250 10.0kb upstream 10.0kb upstream 10000 false chr4: 1460907-1470906 Medicago truncatula
Medtr4g008250 10.0kb downstream 10.0kb downstream 15236 true chr4: 1470907-1486142 Medicago truncatula
Medtr4g008250 10.0kb downstream 10.0kb downstream 10000 false chr4: 1476143-1486142 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304906 5265 Fabidae View MSA
124065848 5270 Rosid View MSA
123753306 5271 Pentapetalae View MSA
122786430 5272 Eudicot View MSA
122042761 5273 Angiosperm View MSA
121349465 5274 Embryophyte View MSA
123426432 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.385     High  
cufflinks 36.609     High  
cufflinks 24.845     High  
cufflinks 16.712     High  
cufflinks 40.238     High  
cufflinks 5.617       Low
cufflinks 23.698     High  
cufflinks 23.27     High  
cufflinks 46.512     High High

0 Strain