Gene : Medtr4g008200 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31288:SF5 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Description:  GDP-fucose protein O-fucosyltransferase
Genomic Order:  195 Name:  ? Medtr4g008200
Secondary Identifier:  ? PAC:31110559
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr4g008200 0.5kb upstream 0.5kb upstream 4534 true chr4: 1453391-1457924 Medicago truncatula
Medtr4g008200 0.5kb upstream 0.5kb upstream 500 false chr4: 1457425-1457924 Medicago truncatula
Medtr4g008200 0.5kb downstream 0.5kb downstream 4534 true chr4: 1452891-1457424 Medicago truncatula
Medtr4g008200 0.5kb downstream 0.5kb downstream 500 false chr4: 1452891-1453390 Medicago truncatula
Medtr4g008200 1.0kb upstream 1.0kb upstream 5034 true chr4: 1453391-1458424 Medicago truncatula
Medtr4g008200 1.0kb upstream 1.0kb upstream 1000 false chr4: 1457425-1458424 Medicago truncatula
Medtr4g008200 1.0kb downstream 1.0kb downstream 5034 true chr4: 1452391-1457424 Medicago truncatula
Medtr4g008200 1.0kb downstream 1.0kb downstream 1000 false chr4: 1452391-1453390 Medicago truncatula
Medtr4g008200 2.0kb upstream 2.0kb upstream 6034 true chr4: 1453391-1459424 Medicago truncatula
Medtr4g008200 2.0kb upstream 2.0kb upstream 2000 false chr4: 1457425-1459424 Medicago truncatula
Medtr4g008200 2.0kb downstream 2.0kb downstream 6034 true chr4: 1451391-1457424 Medicago truncatula
Medtr4g008200 2.0kb downstream 2.0kb downstream 2000 false chr4: 1451391-1453390 Medicago truncatula
Medtr4g008200 5.0kb upstream 5.0kb upstream 9034 true chr4: 1453391-1462424 Medicago truncatula
Medtr4g008200 5.0kb upstream 5.0kb upstream 5000 false chr4: 1457425-1462424 Medicago truncatula
Medtr4g008200 5.0kb downstream 5.0kb downstream 9034 true chr4: 1448391-1457424 Medicago truncatula
Medtr4g008200 5.0kb downstream 5.0kb downstream 5000 false chr4: 1448391-1453390 Medicago truncatula
Medtr4g008200 10.0kb upstream 10.0kb upstream 14034 true chr4: 1453391-1467424 Medicago truncatula
Medtr4g008200 10.0kb upstream 10.0kb upstream 10000 false chr4: 1457425-1467424 Medicago truncatula
Medtr4g008200 10.0kb downstream 10.0kb downstream 14034 true chr4: 1443391-1457424 Medicago truncatula
Medtr4g008200 10.0kb downstream 10.0kb downstream 10000 false chr4: 1443391-1453390 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
122304127 5265 Fabidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.816        
cufflinks 7.474        
cufflinks 4.456        
cufflinks 4.241        
cufflinks 9.482       High
cufflinks 1.326       Low
cufflinks 5.056        
cufflinks 5.119        
cufflinks 10.136       High

0 Strain